Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1694 |
Symbol | |
ID | 5869474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1921103 |
End bp | 1921687 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546811 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001667933 |
Protein GI | 167032702 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.132383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAT TAGACGAAGA AGATCGCCGC GAATACTACC GCATCGAAGA TCGGATCGCA CTTCAAATAA GCCCCCTCAG CGCGGCCGAA GCCCTTGACC CAGATGTGTT GCAAGATGAT TCCCCGCTGT TCAACCTGCT CAGCGAGCTG CACCTGTCCG ACTTCGAGTC GCAGCACCTG TTGCGCCAGC TGAGCGACAA GGACCGCACC CTTGCCGCCT TCCTGCGGGC GCAGAACAAG CGCCTCGACC TGCTCAGCGC GGTGGTTGCA CAAACCCTGC TGGGTGAAGT CGGCCAGCCG TTGCCGGTGG TCATTTCCGA AGGCGGCATC GAGTTCACCC AGGCCACGCA GATTGCCCCC GGCACTCGGG TCAAAGTGAA AATGGTGCTG ATGCCACGCG CCCATGGCCT GCTGCTGCGC GGCAAGGTCA CCCATTGCGA CCCGCGCCCG GAGGGCGGCT TCGAGGTCGG CACCGAATTC ATCGACATGA CCGACGCCCA ACGGCAATTG CTGGCCCGTT ATATCCTGCA GCGCCAGCAA CAGCAGCGGC GCCAGCAACT GGGGCAGAAC GACCCTGCCT CCTGA
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Protein sequence | MTTLDEEDRR EYYRIEDRIA LQISPLSAAE ALDPDVLQDD SPLFNLLSEL HLSDFESQHL LRQLSDKDRT LAAFLRAQNK RLDLLSAVVA QTLLGEVGQP LPVVISEGGI EFTQATQIAP GTRVKVKMVL MPRAHGLLLR GKVTHCDPRP EGGFEVGTEF IDMTDAQRQL LARYILQRQQ QQRRQQLGQN DPAS
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