Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1688 |
Symbol | |
ID | 5869468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1911889 |
End bp | 1912461 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546805 |
Product | hypothetical protein |
Protein accession | YP_001667927 |
Protein GI | 167032696 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.374409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.176627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGCCA TCCGTTGCCT GACCTTGCTG CTGGCGCTGT TCGCCCCAGC TGCCTTCGCC GAAGGCCTGT ATCAGGTAGA AATGATTCTG GTGCGGCAGA ACAGTGTGCC CGCCTTCACC AGCCCGTTCG CCCCCGAAGA CTGGAGCGCC GGCGCCCCGC GCCTGGCAAA AGACGCCGAA CGCCGCCTGG CGCTGGAAGA CGAAGCCACC CGCCTGGAAG CCACCGCCGA CTACACCGTG CTGCTGCACA AGGCCTGGCA ACAGCAAGTA GGCAGCGAGC CCAGCCGCAT CGCGCTGGGC GAAGGCGCCG AGCGGTTCGG CCACTTCCCT ATCGAGGGCA ACCTCAGCGT CGCTGAAGGC CGCTTCATCG CGGTCGAGGC CAACTTCTGG GTCAACCAGC TGGACAGCAA CGGCAACGTA CTGCAAAGCG AGCAGTTCAA GCAGAGCAAC AGCAACGTCA AGGGCGGCCA GCTGACCTTC CTCGACGGTG GGCACCTGGC GGTGCTGCTG AAGGTGACAC CGCCGGGCAC GCCGAAAATG CCGGTGATGG ACCCGGAGAT GATGGAGCAG TGA
|
Protein sequence | MRAIRCLTLL LALFAPAAFA EGLYQVEMIL VRQNSVPAFT SPFAPEDWSA GAPRLAKDAE RRLALEDEAT RLEATADYTV LLHKAWQQQV GSEPSRIALG EGAERFGHFP IEGNLSVAEG RFIAVEANFW VNQLDSNGNV LQSEQFKQSN SNVKGGQLTF LDGGHLAVLL KVTPPGTPKM PVMDPEMMEQ
|
| |