| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1672 |
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| Symbol | |
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| ID | 5869452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1891903 |
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| End bp | 1893828 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546789 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001667911 |
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| Protein GI | 167032680 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.08863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.827941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCC GCCTGTTACA TATTGCATCC TGCCTGCTGC TTACCGCCGC CACCTGCGCG
GCGCAGGCCA CCGACCTGAC CCTGCAACGC CAGTATTATG ACGAGGCCAA GCGTGCGCTG
GCCAAAGGCG ACAAAGGCCC CTACCTGCGC TATGCCCAGG CCCTGAGCGA CTACCCGCTG
ACGCCCTACC TGGCCTACGA CGAGCTCACC GCCCGCCTGA AAAGCGCCAG CAACCAGGAG
ATCGAAGGTT TTCTCGCCAA GCATGGCGAC CTGCCCCAGG CCAACTGGAT GAAGCTGCGT
TGGTTGCGCT GGCTGGCCGA GCGCGGCGAG TGGGACACCT TCGTCAAGTA CTACGACCCC
AAGCTCAACT TCACCGAACT GGACTGCCTC AACGGCCAGT ACCAGCTCAG CCACGGCCTG
CGCGCCGAAG GCTACGCCAC CGCCGATAAG CTGTGGAACG TCGGCAAGTC GCAACCCGCT
GCCTGCGACA CACTGTTCGG CATGTGGGCA GCCGAAGGCC AGCTGACCGA GGCCAAGCGC
TGGGAACGCA CCAAACTGGC GGCCCAGGCA CGCAACTATG GCCTGGCTAA CAACCTGGTC
AAAACCCTGA CTACCCTCGG CCCGCAGGGG AGCCTGCTGG TCGACGTGGC GCAGAAGCCC
GAGCTGCTCA ACCAGCCGTC ACGCTTCACC CCGGTCAACG AAGCGATGTC CGACGTGGTC
AGCCTCGGCC TTCGTCGCCT GGCCCGGCAG GACCCGGAGC GAGCCATGGC GCTACTCGAC
GACTACGCCC AGCGCATGCA CTTCTCCCGC GACGAAAAGG TGGCCATCGC CCGCGAAATC
GGCCTGACCC TGGCGCGTCG TTACGACCCG CGCGCGCTCG ACCTCATGAC CCGCTACGAC
CCCGAGCTGC GCGACAACAC CGTCAGCGAA TGGCGCCTGC GCCTGCTGCT GCGCCTGGGC
CGCTGGGAAG ACGCCTACGA GTTGACCAAA CGCCTGCCCC AGGACCTGGC CAGCAGCAGC
CGCTGGAAGT ACTGGCAGGC TCGCAGCCTG GAGCTGGCAC AGCCAAACAA CCCGCAGATT
CCACTGCTGT ACAAGACCGT GGCGCGTGAA CGCGACTTCT ATGGTTTCCT GGCCGCCGAC
CGGGCACAGA CGCCTTACCA ACTGAACAAC AAGCCGCTGC CGCTGAGCCC GCAACTGGTC
AAAAAGGTGC GCAATACGCC CGGCATTCAA CGCGCACTGG AATTCCACGC CCGTGGCCAG
ATCGTCGAAG GCCGCCGCGA GTGGTACCAC GTCAGCCGTC ACTTCACCCG CGACGAAATG
GTTGCCCAGG CACGCCTGGG CTATGAGCTG CGCTGGTATT TCCCGGCTAT CCGTACCATC
AGTCAGGCGC AGTACTGGGA CGACCTGGAC ATCCGCTTCC CGATGGCCCA CCGCGACACC
CTGGTACGCG AGGCCAAAGT TCGCGGCCTG CATTCGAGCT GGGTATTCGC CATCACCCGC
CAGGAAAGCG CCTTCATGGA AGACGCACGC TCACCGGTGG GCGCCAGCGG CCTGATGCAA
CTGATGCCGG CCACCGCCAA AGAGACCGCG CGCAAGTTCA GCATCCCGCT GGCATCACCC
GCGCAAGTGC TGAACCCAGA CAAGAACATC CAGCTGGGTG CGGCCTACCT GAGCCAGGTC
CACAGCCAAT TCAACGGCAA TCGAGTGCTG GCTTCGGCGG CCTACAACGC CGGCCCCGGG
CGCGTGCGTC AGTGGCTCAA AGGCGCCAAG CACCTGAGTT TCGATGTATG GGTGGAGTCG
ATCCCGTTCG ACGAAACACG CCAGTATGTG CAGAACGTGC TGTCGTATTC GGTGATCTAC
GGGCAGAAGC TGAATTCGCC ACAGCCGCTA GTGGATTGGC ATGAGCGGTA TTTCGACGAC
ATGTAA
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| Protein sequence | MRSRLLHIAS CLLLTAATCA AQATDLTLQR QYYDEAKRAL AKGDKGPYLR YAQALSDYPL
TPYLAYDELT ARLKSASNQE IEGFLAKHGD LPQANWMKLR WLRWLAERGE WDTFVKYYDP
KLNFTELDCL NGQYQLSHGL RAEGYATADK LWNVGKSQPA ACDTLFGMWA AEGQLTEAKR
WERTKLAAQA RNYGLANNLV KTLTTLGPQG SLLVDVAQKP ELLNQPSRFT PVNEAMSDVV
SLGLRRLARQ DPERAMALLD DYAQRMHFSR DEKVAIAREI GLTLARRYDP RALDLMTRYD
PELRDNTVSE WRLRLLLRLG RWEDAYELTK RLPQDLASSS RWKYWQARSL ELAQPNNPQI
PLLYKTVARE RDFYGFLAAD RAQTPYQLNN KPLPLSPQLV KKVRNTPGIQ RALEFHARGQ
IVEGRREWYH VSRHFTRDEM VAQARLGYEL RWYFPAIRTI SQAQYWDDLD IRFPMAHRDT
LVREAKVRGL HSSWVFAITR QESAFMEDAR SPVGASGLMQ LMPATAKETA RKFSIPLASP
AQVLNPDKNI QLGAAYLSQV HSQFNGNRVL ASAAYNAGPG RVRQWLKGAK HLSFDVWVES
IPFDETRQYV QNVLSYSVIY GQKLNSPQPL VDWHERYFDD M
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