Gene PputGB1_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1670 
Symbol 
ID5869450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1890027 
End bp1890962 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID641546787 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_001667909 
Protein GI167032678 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.75876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCA TTCTCGACAC GGTAGACCAA CGCACGCAAT TGGTGGGTGA GAACCGCCTG 
GAAATTCTGA TGTTTCGCCT GGCCGGTCGC CAGTTGTTCG CGATCAACGT GTTCAAGGTG
CAGGAAGTGC TGCAACTGCC CAAGCTCACA CTGATGCCCC AGCGCCATGC CTTCGTCTGC
GGTGTAGTGA ACCTGCGCGG GCAAACCCTG CCGGTGATCG ACCTGTCCCA GGCGATTGGC
ATGCGCCCGC TGCAACCGGG GCCGGACAGC ACGATCATCG TCACCGAATA CAACCGCTCG
GTGCAGGCTT TCCTGGTGGG CGGTGTCGAC CGCATCGTCA ACATGAACTG GGAGTCGATC
ATGCCGCCGC CGACTAGCGC CGGCCGCCAG CATTATCTGA CCGCCATCAC CAAGGTCGAC
GAAAAACTGG TCGAAGTGAT CGACGTGGAG AAGGTGCTGG CTGAAATCGT GCCATACAAC
GCTCGGGTCT CTGGCGATAA ACTCGCCGAC CCGGTGCTGG CCCGGGCCCG TGGCCGCGAG
GTGTTGCTGG TGGATGACTC CAGTGTGGCC CTGGCGCAGT TGCGCGATAC TTTGTCCCAG
TTGGGCATGA AGCTGCACGT GGCCAGTGAT GGTCTGAAGG CGCTGCGCAT GCTCAAGGGC
TGGGCGGATG CTGGCGAGGA CGTGTGCGAG AAGCTGCTGA TGGTGTTTAC CGATGCCGAA
ATGCCGGAAA TGGATGGCTA CCGGCTAACC ACCGAGATCC GCAGCGATGC GCGCCTGCGG
CCCCTTTATG TGGTGCTGCA TACCTCGCTG TCGGGCAGCT TCAACGAATC CATGGTGAAG
AAGGTGGGCT GCGACAACTT CCTTTCCAAG TTTCAGCCTG ATCGCTTGGT CGACGTGGTC
AAGCAACGCC TGTTGCTGGA TAGCGCCACT GCGTGA
 
Protein sequence
MAGILDTVDQ RTQLVGENRL EILMFRLAGR QLFAINVFKV QEVLQLPKLT LMPQRHAFVC 
GVVNLRGQTL PVIDLSQAIG MRPLQPGPDS TIIVTEYNRS VQAFLVGGVD RIVNMNWESI
MPPPTSAGRQ HYLTAITKVD EKLVEVIDVE KVLAEIVPYN ARVSGDKLAD PVLARARGRE
VLLVDDSSVA LAQLRDTLSQ LGMKLHVASD GLKALRMLKG WADAGEDVCE KLLMVFTDAE
MPEMDGYRLT TEIRSDARLR PLYVVLHTSL SGSFNESMVK KVGCDNFLSK FQPDRLVDVV
KQRLLLDSAT A