| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1668 |
|---|
| Symbol | |
|---|
| ID | 5869448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1887905 |
|---|
| End bp | 1888801 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641546785 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001667907 |
|---|
| Protein GI | 167032676 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.891257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCCAC GCTTGAAGAC TTCTCTGCGT TGCTGCCCCC GCGCTGCCCT GCTGCGTTGG
ACGACGGTCG GGCTGTGCGT GGCCTCGCTG CTTGCCAACC TGGCGCTGTA CCTGACCCAT
CAGGCAATCC CGCCCAGCCT GCTGATGCTG CAGCTGGTCG CCACGCTGGG CGCCGCTGTG
CAACTGGGCC TGGGCGCCAG GTCGATCAGC CTGCGTCCGG CCGAGCTGGC CGAGCGCATG
CTCAAGGTGC AGGAAGATGA GCGTCAGCAC CTGGGCCGGG AACTGCACGA CGATATCGGC
CAACTGCTCA CCGCCGCCAA GCTGCAATTG CAGTGGTTGC AGCGGCGCAT GCCCGACGAG
TTGCAGAACC ACTGCGACGC CCTGCGCAGC ACGCTGGATG ACACCTTGGG CAACGTCCGG
GATGTATCTG CCCTGCTCAA CCCGCGGCAG TTGGCCAGCT TGGGCCTGGA AGCCAGCCTG
CGTGCGCACC TGGTACGTAC CTTGGCCAGC AGCGGGGTGC ACTGGAGCCT GGCGTGCAAC
CAGCGACTGG GCGGCATCGA CGAGACGGTA GCCATGGCAG TGTTCCGTAT CACCCAGGAG
GCGGTGACCA ACATGCTGCG TCACGCCCAG GCGCACAACC TGGTCATTCG CCTGCAGCGC
ACTCCAGAGG GGCTTACTTT GTCGATCCAC GACGATGGCT GTGGTTTCGT ACCCGCCCGC
CACCCGGCCG AGGCCGGCCA GCGCGGCCTG GCCGGCATGC AGGAGCGGGT AACCGCGCTG
CAGGGCAGGC TCGACATTAC CAGCCAACTT GGCCTGGGCA CGCAGATCGA GGCGATGTTC
CCGTGGCCTC CGCGCACCCA GCAGCGCGCC AGGAGTACGC CCGCCCATGA CCTGTAG
|
|---|
| Protein sequence | MFPRLKTSLR CCPRAALLRW TTVGLCVASL LANLALYLTH QAIPPSLLML QLVATLGAAV
QLGLGARSIS LRPAELAERM LKVQEDERQH LGRELHDDIG QLLTAAKLQL QWLQRRMPDE
LQNHCDALRS TLDDTLGNVR DVSALLNPRQ LASLGLEASL RAHLVRTLAS SGVHWSLACN
QRLGGIDETV AMAVFRITQE AVTNMLRHAQ AHNLVIRLQR TPEGLTLSIH DDGCGFVPAR
HPAEAGQRGL AGMQERVTAL QGRLDITSQL GLGTQIEAMF PWPPRTQQRA RSTPAHDL
|
|---|
| |