| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1665 |
|---|
| Symbol | |
|---|
| ID | 5869445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1884907 |
|---|
| End bp | 1886154 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546782 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001667904 |
|---|
| Protein GI | 167032673 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.534865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.53265 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC TCTGGACACT GCCTTACTTG CCCTGGCCGA CCACCAGCGG CTGCAAGACC
CGGCAATACC ACTTGCTGCG CGCACTGGCT CAACGCGGCC ACCGGATCAC CCTGCTGGTG
CAGTCGAAAA TCCCCCTCAG CGATGGCGCT CGTGATGCCC TGGAACCACT GCTCGAACGC
CTGATCGTTT TGCCCCGCCG CCCGCTGCAC AGCCCGCTGA ACCTGCTGGC TTCACCCATC
ATCGACTACC CCATGCGAGC CATCATCAAT GGCCTTTCCT CTTGCCTGCG GCACCGCTTC
GAGCAGTTGC TGGACGAGCC CTGGGACGTC ATCCAGATCG AGCACAGCTA CAGCTTCCAG
CCGTTTGAAA AAGCCCTGCA GGCCCGAGGG CTGCCCTACA TGCTCAGCGA GCACACCTTG
GAGTCGGTTA TGGGCGGCGC TTGCCACGAC CGCCTGCCGC TGTGGCTACG CCCGCTCAAC
GCCTTCGACC GCTGGCGCTA TCGGCGCTGG GAACATCGCG TACTGCGCCA GCCCACCGAG
CTGGTGGCGG TCAGCACCCA CGATGCCGAA CTGATTGGCC AGATCAGCGG GCGCCCAGTG
AACGTGGTGG TCAATGGTGT GGATTGTGAT TTTTACCAGC AGGTACAACC TGCGCTGCAC
AGCCAACGCC TGTTGTTCGT CGGCAACTTC GAATATGGCG CCAACCTGGA GGCCATCGAA
TGGGCGCTGG AAGACATCAT GCCGCAGGTA TGGATGAGCA ACCCAGCGGT GCGCCTGGCA
ATTGCCGGGC ATGCAATGCC CGCCAACTGG AAATTGCACT GGAACGACCC GCGCATCGAG
TGGTTGGGCT ACCGACCCGA CCTGCGTGAA CTGCAGCGGC GCTCCGCGCT GTTTTTCGCG
CCACTGCGCT ATGCCGGTGG CTCGAAGGTG AAAATCCTCG AAGCGATGGC CGCCGGCCTG
CCAGTAATCA CCACCGGCAA GGGCGTTTCA GGCCTGAGCG CGAACAATGG CGAGCATTAC
CTGGGCAGCG ACGACGGTGA CCAACTGGCG CTGCTGATCA CCCAGCTGCT CAACCAGCCC
TGGCGCATGA GCCAGTTGAG CGCGGCCGGG CGCCAGTTCG CCCGCCAGCG CCACGACTGG
AGCGTGGCCG CCCAGCAACT GGAGAATGTG CACATGCGCC TGACCCAGGT GGCCCCGGCC
GAGGCCGCGC CGCTGGCCAA TGCCTGGCTG GGTCGCTCAG CCAAGTAA
|
|---|
| Protein sequence | MRILWTLPYL PWPTTSGCKT RQYHLLRALA QRGHRITLLV QSKIPLSDGA RDALEPLLER
LIVLPRRPLH SPLNLLASPI IDYPMRAIIN GLSSCLRHRF EQLLDEPWDV IQIEHSYSFQ
PFEKALQARG LPYMLSEHTL ESVMGGACHD RLPLWLRPLN AFDRWRYRRW EHRVLRQPTE
LVAVSTHDAE LIGQISGRPV NVVVNGVDCD FYQQVQPALH SQRLLFVGNF EYGANLEAIE
WALEDIMPQV WMSNPAVRLA IAGHAMPANW KLHWNDPRIE WLGYRPDLRE LQRRSALFFA
PLRYAGGSKV KILEAMAAGL PVITTGKGVS GLSANNGEHY LGSDDGDQLA LLITQLLNQP
WRMSQLSAAG RQFARQRHDW SVAAQQLENV HMRLTQVAPA EAAPLANAWL GRSAK
|
|---|
| |