Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1661 |
Symbol | |
ID | 5869440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1880966 |
End bp | 1882546 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546777 |
Product | malate:quinone oxidoreductase |
Protein accession | YP_001667900 |
Protein GI | 167032669 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.278374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT TTCTGCTGAC GTTCCTCTGC CTGGGCGTCA TCGGCTGCTC CAAACCTGCC GAGCCTGAGA AAACCGTCGA CGTGCTGTTG ATCGGTGGCG GCATCATGAG TGCCAGCCTG GGCACTTACC TCACCGAGCT GGAACCGTCC TGGAAGGTCG ACGTCTACGA GCGCATGGAC CAGGTCGCCG AAGAAAGCTC CAACGCCTGG AACAACGCCG GCACCGGTCA CTCTGCATTC TGCGAGCTGA ACTACACCAG CGTCGGCAAG GATGGCAGCA TCGACATCAG CAAGGCCGTG GGGGTGAACG AGCAGTTCGA GGTGTCCAAG CAGTTCTGGG CCTACCAGGT CGAGCAGGGC GTGCTGAACA ACCCAAGATC GTTCATCAAC AATGTGCCGC ACATGAGTTT CGTCTGGGGA GACGAGAACA TTGCCTTCTT GCACAAGCGC GTCGATGCCC TGCAACACAG CTCGCTATTC CGCGGCATGG AAATCTCCGA GGACCACGAG CAGATTCGCC AATGGGCGCC GCTGGTCATG GAGGGCCGTG ACCCGGGGCA GAAGATCGCC GCCACGCGCA TGGCCATCGG CACCGACGTG AACTTCGGCG AAATCACCCG CCAGCTGTTC GCTGCAATGA CTCGCAACCC CAACGTGTCG CTGAATGTGC GTCATGAAGT GCGTGACATC GTACGTAACG ACGATGGCAC CTGGCATGTA GTCGTGGCCG ACCTGGCCAA CGGCGGCAAT GAGAAGGCTG TCAATGCCCG CTTCGTCTTC ATTGGTGCCG GTGGCGGCGC ACTGAAGTTG TTGCAGAAGT CGGGCATCCC CGAGGCCGAA GGCTATGCGG GCTTCCCGGT GGGGGGCCAG TTCCTGATGA CCGATAACCC TGACCTGGTC GCGCGTCACC AGGCCAAACT GTACGGCAAG GCTTCGGTTG GCGCTCCACC CATGTCGGTG CCGCACCTGG ACACGCGGAT GATCGATGGC AAACAGGTGC TGTTGTTCGG CCCGTTCGCC ACGTTCTCCA CCAAGTACCT CAAGCACGGT TCGCTGCTGG ACATGTTCGC CTCGCTGAAC AGCCACAACG TGTTGCCCAT GCTCAATGCC GGTATCGACA ACATCGACCT CAGCACCTAC CTGATGGGGC AATTGATGCT CAGCTTCGAT GACCGCATGA ACGCGCTGCG CGAGTACTTC CCCAACGCCA AGAACGAAGA CTGGAAGCTG CTGCAGGCTG GCCAGCGGGT GCAGGTGATC AAGAAGGACC CGGTACTGGG TGGTGTGCTG CAGTTCGGTA CCGAAGTGGT GGCGGCGCAG GACGGCAGTA TCGCCGCGCT GTTGGGCGCT TCGCCTGGCG CCTCGACCGC CGCGCCGATC ATGCTGACCG TGCTGGAAAA GACCTTCAAG GACCGCATCC AGTCGCCTGC CTGGCAGGCC AGGCTCAAGG AAATCGTGCC GAGCTACGGC CAGAAGCTGA ACAACGACCT GGCGCTGACC AACCAGACCC GCGCGTGGAG CAGCGAGCGC TTGCAGTTGT TGCACATGCC CGTAGAAGCT GAAGCCCAAG CCGCGCACTG A
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Protein sequence | MKKFLLTFLC LGVIGCSKPA EPEKTVDVLL IGGGIMSASL GTYLTELEPS WKVDVYERMD QVAEESSNAW NNAGTGHSAF CELNYTSVGK DGSIDISKAV GVNEQFEVSK QFWAYQVEQG VLNNPRSFIN NVPHMSFVWG DENIAFLHKR VDALQHSSLF RGMEISEDHE QIRQWAPLVM EGRDPGQKIA ATRMAIGTDV NFGEITRQLF AAMTRNPNVS LNVRHEVRDI VRNDDGTWHV VVADLANGGN EKAVNARFVF IGAGGGALKL LQKSGIPEAE GYAGFPVGGQ FLMTDNPDLV ARHQAKLYGK ASVGAPPMSV PHLDTRMIDG KQVLLFGPFA TFSTKYLKHG SLLDMFASLN SHNVLPMLNA GIDNIDLSTY LMGQLMLSFD DRMNALREYF PNAKNEDWKL LQAGQRVQVI KKDPVLGGVL QFGTEVVAAQ DGSIAALLGA SPGASTAAPI MLTVLEKTFK DRIQSPAWQA RLKEIVPSYG QKLNNDLALT NQTRAWSSER LQLLHMPVEA EAQAAH
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