Gene PputGB1_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1661 
Symbol 
ID5869440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1880966 
End bp1882546 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content61% 
IMG OID641546777 
Productmalate:quinone oxidoreductase 
Protein accessionYP_001667900 
Protein GI167032669 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.278374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT TTCTGCTGAC GTTCCTCTGC CTGGGCGTCA TCGGCTGCTC CAAACCTGCC 
GAGCCTGAGA AAACCGTCGA CGTGCTGTTG ATCGGTGGCG GCATCATGAG TGCCAGCCTG
GGCACTTACC TCACCGAGCT GGAACCGTCC TGGAAGGTCG ACGTCTACGA GCGCATGGAC
CAGGTCGCCG AAGAAAGCTC CAACGCCTGG AACAACGCCG GCACCGGTCA CTCTGCATTC
TGCGAGCTGA ACTACACCAG CGTCGGCAAG GATGGCAGCA TCGACATCAG CAAGGCCGTG
GGGGTGAACG AGCAGTTCGA GGTGTCCAAG CAGTTCTGGG CCTACCAGGT CGAGCAGGGC
GTGCTGAACA ACCCAAGATC GTTCATCAAC AATGTGCCGC ACATGAGTTT CGTCTGGGGA
GACGAGAACA TTGCCTTCTT GCACAAGCGC GTCGATGCCC TGCAACACAG CTCGCTATTC
CGCGGCATGG AAATCTCCGA GGACCACGAG CAGATTCGCC AATGGGCGCC GCTGGTCATG
GAGGGCCGTG ACCCGGGGCA GAAGATCGCC GCCACGCGCA TGGCCATCGG CACCGACGTG
AACTTCGGCG AAATCACCCG CCAGCTGTTC GCTGCAATGA CTCGCAACCC CAACGTGTCG
CTGAATGTGC GTCATGAAGT GCGTGACATC GTACGTAACG ACGATGGCAC CTGGCATGTA
GTCGTGGCCG ACCTGGCCAA CGGCGGCAAT GAGAAGGCTG TCAATGCCCG CTTCGTCTTC
ATTGGTGCCG GTGGCGGCGC ACTGAAGTTG TTGCAGAAGT CGGGCATCCC CGAGGCCGAA
GGCTATGCGG GCTTCCCGGT GGGGGGCCAG TTCCTGATGA CCGATAACCC TGACCTGGTC
GCGCGTCACC AGGCCAAACT GTACGGCAAG GCTTCGGTTG GCGCTCCACC CATGTCGGTG
CCGCACCTGG ACACGCGGAT GATCGATGGC AAACAGGTGC TGTTGTTCGG CCCGTTCGCC
ACGTTCTCCA CCAAGTACCT CAAGCACGGT TCGCTGCTGG ACATGTTCGC CTCGCTGAAC
AGCCACAACG TGTTGCCCAT GCTCAATGCC GGTATCGACA ACATCGACCT CAGCACCTAC
CTGATGGGGC AATTGATGCT CAGCTTCGAT GACCGCATGA ACGCGCTGCG CGAGTACTTC
CCCAACGCCA AGAACGAAGA CTGGAAGCTG CTGCAGGCTG GCCAGCGGGT GCAGGTGATC
AAGAAGGACC CGGTACTGGG TGGTGTGCTG CAGTTCGGTA CCGAAGTGGT GGCGGCGCAG
GACGGCAGTA TCGCCGCGCT GTTGGGCGCT TCGCCTGGCG CCTCGACCGC CGCGCCGATC
ATGCTGACCG TGCTGGAAAA GACCTTCAAG GACCGCATCC AGTCGCCTGC CTGGCAGGCC
AGGCTCAAGG AAATCGTGCC GAGCTACGGC CAGAAGCTGA ACAACGACCT GGCGCTGACC
AACCAGACCC GCGCGTGGAG CAGCGAGCGC TTGCAGTTGT TGCACATGCC CGTAGAAGCT
GAAGCCCAAG CCGCGCACTG A
 
Protein sequence
MKKFLLTFLC LGVIGCSKPA EPEKTVDVLL IGGGIMSASL GTYLTELEPS WKVDVYERMD 
QVAEESSNAW NNAGTGHSAF CELNYTSVGK DGSIDISKAV GVNEQFEVSK QFWAYQVEQG
VLNNPRSFIN NVPHMSFVWG DENIAFLHKR VDALQHSSLF RGMEISEDHE QIRQWAPLVM
EGRDPGQKIA ATRMAIGTDV NFGEITRQLF AAMTRNPNVS LNVRHEVRDI VRNDDGTWHV
VVADLANGGN EKAVNARFVF IGAGGGALKL LQKSGIPEAE GYAGFPVGGQ FLMTDNPDLV
ARHQAKLYGK ASVGAPPMSV PHLDTRMIDG KQVLLFGPFA TFSTKYLKHG SLLDMFASLN
SHNVLPMLNA GIDNIDLSTY LMGQLMLSFD DRMNALREYF PNAKNEDWKL LQAGQRVQVI
KKDPVLGGVL QFGTEVVAAQ DGSIAALLGA SPGASTAAPI MLTVLEKTFK DRIQSPAWQA
RLKEIVPSYG QKLNNDLALT NQTRAWSSER LQLLHMPVEA EAQAAH