Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1655 |
Symbol | |
ID | 5869434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1873460 |
End bp | 1874524 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546771 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_001667894 |
Protein GI | 167032663 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0111159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.447876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC TGTTCATGCA TTGCCGGCCC GGTTTCGAGG GTGAGGTTTG CGCCGAAATC AGCGAACATG CCGCCCGCCT GGGTGTTTCC GGCTATGCCA AAAGCAAGCC GCAAAGTGCC AGCGCCGAGT TTGTCTGCAG CGAGGAGGGC GGTGCCGAGC GGTTGATGGG GGAGCTGCGC TTCAACCAGC TGATTTTCCC GCGGCAGTGG GCCCGTGGTG GTTTTGTCGA GCTGCCGGAA ACTGACCGCA TCAGTGTGCT GCTGTCGCAG CTGGCCGATT TCCCGGTGTT CGGCAGCCTG TGGCTGGAGG TGCTGGACAG CAATGAAGGC AAGGAATTGT CCACCTTCTG CCGCAAGTTC GAAGTGCCGT TGCGCAAGGC GCTGGAGAAG GCCGGCCGGC TGGTCGACGA TGCCAGTCGG CCGCGCTTGC TGCTCAGCTT CATCAGTGGC CGGCGGGTCT TTGTCGGTGT TGCCCCAGCC AACAACAGCG CGTTGTGGCC CATGGGGATT CCGCGCCTGA AGTTCCCCCG CGAGGCGCCT AGCCGTTCGA CCCTCAAGCT GGAAGAAGCC TGGCATCAGT TCATCCCGCG TGAGCAGTGG GAACAGCGCC TGGGTGATGA CATGACCGGC GTCGACCTGG GGGCCTCGCC GGGGGGATGG ACCTATCAGC TGGTGCGCCG TGGCATGTTG GTGACGGCGA TCGACAACGG GCCGATGGCC GAAAGCCTGA TGGATACTGG GCTGGTTCAG CACCTGATGG CTGATGGGTT CACCTGGCAG CCGAAGCAGC CGGTGGACTG GATGGTGTGC GACATCGTCG AGAAGCCGGC GCGTACTACC TCACTGATCG AGACCTGGCT GGGGGAGGGA CTGTGTCGCG AGGCGGTGGT CAACTTGAAA TTGCCGATGA AGCAGCGCTA TGCCGAAGTA CGGCGGCTGC TCGACCGCAT GGAGGCGACG TTCAAGGCAC GCAAAATTCG GGTGTCGATT GCTTGCAAGC AGCTGTATCA CGACCGGGAG GAAGTGACTT GTCACCTGCG TCGGCTTGAT TTGAAACCGC GCTAA
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Protein sequence | MNTLFMHCRP GFEGEVCAEI SEHAARLGVS GYAKSKPQSA SAEFVCSEEG GAERLMGELR FNQLIFPRQW ARGGFVELPE TDRISVLLSQ LADFPVFGSL WLEVLDSNEG KELSTFCRKF EVPLRKALEK AGRLVDDASR PRLLLSFISG RRVFVGVAPA NNSALWPMGI PRLKFPREAP SRSTLKLEEA WHQFIPREQW EQRLGDDMTG VDLGASPGGW TYQLVRRGML VTAIDNGPMA ESLMDTGLVQ HLMADGFTWQ PKQPVDWMVC DIVEKPARTT SLIETWLGEG LCREAVVNLK LPMKQRYAEV RRLLDRMEAT FKARKIRVSI ACKQLYHDRE EVTCHLRRLD LKPR
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