Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1621 |
Symbol | |
ID | 5869401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1833992 |
End bp | 1834654 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641546739 |
Product | hypothetical protein |
Protein accession | YP_001667862 |
Protein GI | 167032631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.297106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.646941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCATA CGGTGTTGGG AGCGCGTGTT CATACTTTGT TTGAAGAGCA TGAGGCTCCA GAGTGGCGAT TTGTTTACCA TGCGCTTAAT TGTGAGTGGT TTTATGTCAC GAAAATCGAG TGGGAGAATG GTGAGCCGAC GGGCTCCTAC ATGATGATGA TTGGGGATAT TGCAGAGCTT CATATGTTGC TATCTGCCAA GCTGGCGAAC ACAACGATCA GCAAAATCTA CGTTGTAACG CCTGGACATA TCAACGGGAC CGAGCGCTGG GATTGCAATC TTCTCCTCAA GATAGATGAG GTTGACGACG TTTACCCAGG GTGTGCCAAT GTTAATCACA TTTATACGGT TGACCGTAAC GGCCCTGTGG AATTGTATTC TTCGGAGCCA GATGGCAAGT GGGAAAAGAA CGATCGGGTT GTTCTGTATG ACGTTGGCCC TGACGTTTTG AAGATCGTAG AAGCAGAACG TAGTGAACAA GCTAAACGGC TGGCCTCCAT TATGCTCGTC TCAGCGCGAA TTCACAGGAA CGATGCCGGC GCCTCGAACC TATGGTTGCT GACGCCAAAT AGCGAACTCG GCGGACGTCG TCCGATTGAT ATGACTAGTG CTGTAGATTA CGACTGGCTC CAAAGCCATA TCAAACAAAA GCATTCATTG TGA
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Protein sequence | MFHTVLGARV HTLFEEHEAP EWRFVYHALN CEWFYVTKIE WENGEPTGSY MMMIGDIAEL HMLLSAKLAN TTISKIYVVT PGHINGTERW DCNLLLKIDE VDDVYPGCAN VNHIYTVDRN GPVELYSSEP DGKWEKNDRV VLYDVGPDVL KIVEAERSEQ AKRLASIMLV SARIHRNDAG ASNLWLLTPN SELGGRRPID MTSAVDYDWL QSHIKQKHSL
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