Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1614 |
Symbol | |
ID | 5869394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1824221 |
End bp | 1825102 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641546732 |
Product | integrase catalytic region |
Protein accession | YP_001667855 |
Protein GI | 167032624 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.670062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACTGA AGTACGCCTT CATCAAGAAG CACTCGACGG ATCACCCGGT GCGGCGCCTA TGCCAAACCC TAAAGGTGCA TCCCAGCGGC TACTACGCCT GGCTGACCGA GCCTCAATCT GCCCGAGCAA AAGAAGATCA TCGTCTGCTT GGCTTGATCA AACATGCTTG GCTCGAAAGC GGAGGTGTGT ACGGCTACCG CAAAATTCAT GATGACCTGC GTGAGCTGGG AGAGACATGC GGGCGCAATC GAGTCGGACG CTTGATGCAG GCAGAGGGGT TGCGTTCGCA AACGGGCTAT CGGCGGCGTC CAGGGTTTTA CGGTGGAAAG CCAACAGTGG CCTCTCCCAA CCATCTCGCG CGGCAGTTCA AAGTCAGTGA GCCGAATAAG GTCTGGGTAA CCGATATCAC TTACATCCGC ACCTATGAAG GATGGCTGTA CCTAGCGGTA GTCCTGGATC TGTTTTCCCG CCAAGTGATT GGCTGGTCAA TGAAGCCCCG CATGTGCAGC GACCTGGCGC TTGACGCGAT GTTGATGGCC GTGTGGCGCC GCAAACCACG GCAGCAAGTG ATGATCCATT CAGACCAAGG CAGTCAATTC AGTAGCTCAG ACTGGCAAAG CTTCTTGAAG GCCAACAATA TAATCAGCAG CATGAGTCGG CGGGGAAATT GCCACGACAA TGCCGTAGCC GAAAGCTTTT TCCAGCTTTT GAAGCGGGAG CGAATCCGAC GAAAAATCTA CGCAACACGT GACGAAGCCC GAAGTGATAT TTTCGATTAC ATTGAAATGT TTTATAACCC AAGGCGCAGA CACAGCAGTG CTATGCAGCT GTCGCCAGTA GAGTATGAGA AACGCTATTT TCTGAGCTTG GAGAGTGTCT AG
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Protein sequence | MQLKYAFIKK HSTDHPVRRL CQTLKVHPSG YYAWLTEPQS ARAKEDHRLL GLIKHAWLES GGVYGYRKIH DDLRELGETC GRNRVGRLMQ AEGLRSQTGY RRRPGFYGGK PTVASPNHLA RQFKVSEPNK VWVTDITYIR TYEGWLYLAV VLDLFSRQVI GWSMKPRMCS DLALDAMLMA VWRRKPRQQV MIHSDQGSQF SSSDWQSFLK ANNIISSMSR RGNCHDNAVA ESFFQLLKRE RIRRKIYATR DEARSDIFDY IEMFYNPRRR HSSAMQLSPV EYEKRYFLSL ESV
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