Gene PputGB1_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1614 
Symbol 
ID5869394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1824221 
End bp1825102 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID641546732 
Productintegrase catalytic region 
Protein accessionYP_001667855 
Protein GI167032624 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.670062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACTGA AGTACGCCTT CATCAAGAAG CACTCGACGG ATCACCCGGT GCGGCGCCTA 
TGCCAAACCC TAAAGGTGCA TCCCAGCGGC TACTACGCCT GGCTGACCGA GCCTCAATCT
GCCCGAGCAA AAGAAGATCA TCGTCTGCTT GGCTTGATCA AACATGCTTG GCTCGAAAGC
GGAGGTGTGT ACGGCTACCG CAAAATTCAT GATGACCTGC GTGAGCTGGG AGAGACATGC
GGGCGCAATC GAGTCGGACG CTTGATGCAG GCAGAGGGGT TGCGTTCGCA AACGGGCTAT
CGGCGGCGTC CAGGGTTTTA CGGTGGAAAG CCAACAGTGG CCTCTCCCAA CCATCTCGCG
CGGCAGTTCA AAGTCAGTGA GCCGAATAAG GTCTGGGTAA CCGATATCAC TTACATCCGC
ACCTATGAAG GATGGCTGTA CCTAGCGGTA GTCCTGGATC TGTTTTCCCG CCAAGTGATT
GGCTGGTCAA TGAAGCCCCG CATGTGCAGC GACCTGGCGC TTGACGCGAT GTTGATGGCC
GTGTGGCGCC GCAAACCACG GCAGCAAGTG ATGATCCATT CAGACCAAGG CAGTCAATTC
AGTAGCTCAG ACTGGCAAAG CTTCTTGAAG GCCAACAATA TAATCAGCAG CATGAGTCGG
CGGGGAAATT GCCACGACAA TGCCGTAGCC GAAAGCTTTT TCCAGCTTTT GAAGCGGGAG
CGAATCCGAC GAAAAATCTA CGCAACACGT GACGAAGCCC GAAGTGATAT TTTCGATTAC
ATTGAAATGT TTTATAACCC AAGGCGCAGA CACAGCAGTG CTATGCAGCT GTCGCCAGTA
GAGTATGAGA AACGCTATTT TCTGAGCTTG GAGAGTGTCT AG
 
Protein sequence
MQLKYAFIKK HSTDHPVRRL CQTLKVHPSG YYAWLTEPQS ARAKEDHRLL GLIKHAWLES 
GGVYGYRKIH DDLRELGETC GRNRVGRLMQ AEGLRSQTGY RRRPGFYGGK PTVASPNHLA
RQFKVSEPNK VWVTDITYIR TYEGWLYLAV VLDLFSRQVI GWSMKPRMCS DLALDAMLMA
VWRRKPRQQV MIHSDQGSQF SSSDWQSFLK ANNIISSMSR RGNCHDNAVA ESFFQLLKRE
RIRRKIYATR DEARSDIFDY IEMFYNPRRR HSSAMQLSPV EYEKRYFLSL ESV