| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1608 |
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| Symbol | rlmL |
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| ID | 5869388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1815311 |
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| End bp | 1817503 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546726 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001667849 |
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| Protein GI | 167032618 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.159338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACC GTTTCGAACT TTATCTCACC TGCCCTAAAG GCCTTGAAGG CCTGCTTGCC
GAAGAGGCCA AGGGCCTTGG CCTTGAAGAG GTGCGCGAGC ACACCTCGGC CATTCGCGGC
GCCGCCGACA TGGAAACCGC CTACCGCCTG TGCGTATGGT CTCGCCTGGC CAACCGGGTA
CTGTTGGTAC TCAAGCGCTT CAGCATGAAG AACGCCGATG ACCTTTACGA TGGCGTCAAT
GCCGTCGACT GGGCCGACCA CCTGGCGGCT GACGGCACGC TGGCGGTTGA ATTCAGCGGC
CATGGCTCGG GCATCGACAA CACCCACTTC GGTGCGCTGA AGGTCAAGGA TGCGATCGTC
GACAAGCTGC GCAATCGCGA GGGCCTGCGC CCGTCGGTGG AAAAGATCGA CCCGGACGTG
CGCGTGCACC TGCGCCTGGA CCGCGGCGAG GCCATCCTCT CCCTCGACCT GTCCGGCCAC
AGCCTGCACC AGCGTGGCTA CCGCCTGCAG CAGGGCGCCG CGCCATTGAA AGAAAACCTG
GCGGCAGCGG TGTTGATCCG TTCCGGCTGG CCGCGCATTG CCGCCGAAGG CGGCGCACTG
GCCGACCCGA TGTGCGGCGT GGGTACCTTC CTGGTCGAGG CGGCGATGAT CGCTGCCGAC
ATCGCCCCCA ACCTCAAACG TGAACGCTGG GGCTTCAGTG CCTGGCTCGG CCACGTGCCG
GCGTTGTGGC GCAAGGTGCA TGACGAAGCG CAGGCCCGCG CGCAGGCTGG CCTCGCCAAG
CCACCTCTGT GGATCCGTGG CTACGAGGCC GACCCGCGGC TGATCCAGCC GGGCCGCAAC
AACGTCGAGC GTGCCGGCCT GGGCGACTGG GTGAAGATCT ACCAGGGCGA AGTCAGCACG
TTCGAGCCAC GCCCGGACCA GAACCAGAAA GGCCTGGTCA TCAGTAACCC GCCCTACGGC
GAGCGTCTGG GTGACGAGGC CAGCCTGCTG TACCTCTACC AGAACCTCGG CGAGCGCCTG
CGCCAGGCTT GCATGGGCTG GGAGGCGGCG GTGTTCACCG GCGCACCGCA GCTGGGCAAG
CGCATGGGTA TTCGCAGCCA CAAGCAATAC GCGTTCTGGA ACGGCGCCTT GCCGTGCAAG
CTGTTGCTGT TCAAGGTGCA GCCTGACCAG TTCGTCACTG GCGAACGCCG TGAGGCGCAG
CCTGAAGGCA CCGAAGTCCG CCAGCAGGCC CCGCAGGCCA GCGAGCCGGC GCGGCTGTCG
GAAGGGGCGC AGATGTTTGC CAATCGCCTG CAGAAAAACC TCAAGCAACT GGGCAAGTGG
GCCCGTCGCG AGCAGATCGA CTGCTACCGC CTGTACGATG CCGACATGCC CGAATATGCC
CTGGCGGTCG ACCTGTACCA GGACTGGGTC CATGTGCAGG AGTACGCTGC GCCACGTTCG
ATCGACCCGG ACAAGGCCCA GGCCCGCCTG CTCGATGCGC TGGCGGCTAT CCCGCAGGCG
CTGGGCATTT CGCCGCAACG TGTGGTGCTC AAACGACGCG AGCGCCAGAG CGGCACGCGC
CAGTATGAGC GCCAGGCGAC CGAGGGCCGT TTCCAGGAGG TCAACGAAGG TGGCGTCAAG
TTGCTGGTCA ACCTTACCGA CTACCTCGAT ACAGGGCTGT TCCTCGACCA CCGCCCGATG
CGCATGCGCA TTCAGCGCGA AGCGGCCGGC AAGCGCTTCC TCAACTTGTT CTGCTACACC
GCCACGGCCA CCGTGCATGC GGCCAAGGGC GGTGCGCGCA GCACCACCAG TGTCGACTTG
TCGAAAACCT ACCTGGACTG GGCACGGCGC AACCTGGCGC TCAATGGCTA CTCCGAGCGC
AACCGCCTTG AGCAGAGCGA TGTGATGGCC TGGCTGGAAG GTAACCGCGA CAGCTACGAC
CTGATCTTCA TCGACCCGCC AACCTTCTCC AACTCCAAAC GCATGGAAGG CGTGTTCGAC
GTGCAGCGTG ACCATGTGCA ACTGCTGGAC CTGGCCATGG CCCGCCTGGC ACCGGGCGGC
GTGCTGTATT TCTCCAACAA CTTCCGCAAG TTCCAGTTGG ACGAGCATCT GATGGCACGT
TATGCCGTGG AGGAAATCAC CGCCCAGACG CTGGACCCGG ACTTTGCCCG TAACAACCGG
ATCCACCGCG CCTGGCGCCT GCAATTGCGT TGA
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| Protein sequence | MSDRFELYLT CPKGLEGLLA EEAKGLGLEE VREHTSAIRG AADMETAYRL CVWSRLANRV
LLVLKRFSMK NADDLYDGVN AVDWADHLAA DGTLAVEFSG HGSGIDNTHF GALKVKDAIV
DKLRNREGLR PSVEKIDPDV RVHLRLDRGE AILSLDLSGH SLHQRGYRLQ QGAAPLKENL
AAAVLIRSGW PRIAAEGGAL ADPMCGVGTF LVEAAMIAAD IAPNLKRERW GFSAWLGHVP
ALWRKVHDEA QARAQAGLAK PPLWIRGYEA DPRLIQPGRN NVERAGLGDW VKIYQGEVST
FEPRPDQNQK GLVISNPPYG ERLGDEASLL YLYQNLGERL RQACMGWEAA VFTGAPQLGK
RMGIRSHKQY AFWNGALPCK LLLFKVQPDQ FVTGERREAQ PEGTEVRQQA PQASEPARLS
EGAQMFANRL QKNLKQLGKW ARREQIDCYR LYDADMPEYA LAVDLYQDWV HVQEYAAPRS
IDPDKAQARL LDALAAIPQA LGISPQRVVL KRRERQSGTR QYERQATEGR FQEVNEGGVK
LLVNLTDYLD TGLFLDHRPM RMRIQREAAG KRFLNLFCYT ATATVHAAKG GARSTTSVDL
SKTYLDWARR NLALNGYSER NRLEQSDVMA WLEGNRDSYD LIFIDPPTFS NSKRMEGVFD
VQRDHVQLLD LAMARLAPGG VLYFSNNFRK FQLDEHLMAR YAVEEITAQT LDPDFARNNR
IHRAWRLQLR
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