| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1600 |
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| Symbol | |
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| ID | 5869380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1806488 |
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| End bp | 1807522 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641546718 |
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| Product | OmpF family protein |
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| Protein accession | YP_001667841 |
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| Protein GI | 167032610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000517848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00289016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATTGA AAAACACCTT GGGCTTGGCC ATTGGTTCGC TCGTAGCCGC CACCTCGATT
GGCGCTATGG CACAAGGTCA AGGCGCCGTC GAGACCGAAG TTTTCTACAA GAAAGAATTC
TTCGACAGCC AGCGCGACTT CAAGAACGAC GGCAACCTGT TCGGCGGCTC GATCGGTTAC
TTCCTGACCG ACGACGTTGA ACTGCGTCTG GGCTACGACG AAGTGCACAA CGCTCGTGGC
GAAGACGGCA AGAACATCAA GGGCTCGAAC ACCGCCCTGG ACGCCGTTTA CCACTTCAAC
AACCCGTACG ACGCTATCCG TCCGTACGTT TCCGCTGGTT TCTCGCACCA GTCGCTGGGC
CAGACCGGCC GTGGCGGTCG TGACCACTCC ACCTTCGCCA ACGTTGGCGC TGGCGCCAAG
TGGTACATCA CCGACATGTT CTACGCCCGT GCCGGCGTAG AAGCTCAGTA CAACATCGAC
CAGGGCGACA CCGAGTGGGC CCCAAGCGTT GGTGTTGGCC TGAACTTCGG CGGTAGCCCG
AAGCAAGCCG AAGCCGCTCC AGCTCCAGTT GCTGAAGTTT GCTCCGACTC CGACAACGAC
GGCGTTTGCG ACAACGTCGA CAAGTGCCCA GACACCCCGG CCAACGTTAC CGTTGACGCC
GACGGCTGCC CGGCTGTTGC CGAAGTCGTT CGTGTTGAGC TGGACGTCAA GTTCGACTTC
GACAAGTCGG TCGTCAAGCC AAACAGCTAC GGCGACATCA AAAACCTGGC TGACTTCATG
AAGCAGTACC CACAAACCAC CACCGTGGTT GAAGGTCACA CTGACTCCGT GGGTCCAGAC
GCTTACAACC AGAAGCTGTC CGAGCGTCGT GCCAACGCTG TCAAGCAAGT CCTGACCCAG
CAGTACGGCG TAGAATCCAG CCGTGTTGAC TCGGTTGGCT ACGGCGAAAC CCGTCCGGTT
GCTGACAACG CCACCGAAGA AGGCCGTGCT ATCAACCGTC GCGTTGAAGC TCAGGTAGAA
GCTCAGTCCA AGTAA
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| Protein sequence | MKLKNTLGLA IGSLVAATSI GAMAQGQGAV ETEVFYKKEF FDSQRDFKND GNLFGGSIGY
FLTDDVELRL GYDEVHNARG EDGKNIKGSN TALDAVYHFN NPYDAIRPYV SAGFSHQSLG
QTGRGGRDHS TFANVGAGAK WYITDMFYAR AGVEAQYNID QGDTEWAPSV GVGLNFGGSP
KQAEAAPAPV AEVCSDSDND GVCDNVDKCP DTPANVTVDA DGCPAVAEVV RVELDVKFDF
DKSVVKPNSY GDIKNLADFM KQYPQTTTVV EGHTDSVGPD AYNQKLSERR ANAVKQVLTQ
QYGVESSRVD SVGYGETRPV ADNATEEGRA INRRVEAQVE AQSK
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