Gene PputGB1_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1592 
Symbol 
ID5869372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1798357 
End bp1799175 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content57% 
IMG OID641546710 
Producthypothetical protein 
Protein accessionYP_001667833 
Protein GI167032602 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.252196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.045095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA CCGCGTTCTT CATCTCCGAC GGCACCGGTA TCACTGCCGA AACCCTGGGC 
CAGAGTCTGC TCGCGCAATT CGAGAGCATT CCGTTCAACA AATTCACCCG TCCCTACATC
GATTCGCCAG ACAAAGCGCG GACCATGGTC CAGCAAATCA ACGCTGCGGC CGAGCGTGAC
GGGGTACGCC CGATCATCTT CGACACCATC GTCAACCAGG ACATTCGCGA GATTCTGGCA
ACGTCGAATG GCTTCATGAT CGACATCTTT TCTTCGTTTT TATCCCCACT TGAGCAAGAA
TTGACCGCCC ATTCGTCGTA TTCCGTGGGC AAATCGCACT CGATCGGCGG CAACTCAAAC
TACATGGAAC GCATCGAGGC GGTGAATTTC GCCTTGGATA ACGACGACGG TGCGCGCACC
CACTACTACG ACAAGGCCGA CCTTATCCTG GTTGGCGTGT CGCGCTGCGG CAAAACCCCT
ACCTGCCTGT ACATGGCCAT GCAGTTCGGC ATCCGCGCCG CCAACTACCC GCTGACCGAG
GACGACATGG AACGCCTGCA GTTGCCGGCG GTGCTGAAAA AGCACCACAA CAAGCTGTTC
GGCCTGACCA TCGACCCCGA CCGCCTCACC GCCATCCGCC ACGAGCGCAA GCCCAACAGC
CGCTATTCCA GCTTTGCCCA GTGCGAATTC GAAGTGCGCG AGGTGGAGAG CCTGTTCCGC
AGGGAGAACA TTCCCAACAT CAATTCCACG CATTTTTCGG TGGAAGAGAT TTCGGCGAAG
ATTCTGGTCG AGAAAGGGGT GGAGCGCAGG TTCAAGTAA
 
Protein sequence
MKRTAFFISD GTGITAETLG QSLLAQFESI PFNKFTRPYI DSPDKARTMV QQINAAAERD 
GVRPIIFDTI VNQDIREILA TSNGFMIDIF SSFLSPLEQE LTAHSSYSVG KSHSIGGNSN
YMERIEAVNF ALDNDDGART HYYDKADLIL VGVSRCGKTP TCLYMAMQFG IRAANYPLTE
DDMERLQLPA VLKKHHNKLF GLTIDPDRLT AIRHERKPNS RYSSFAQCEF EVREVESLFR
RENIPNINST HFSVEEISAK ILVEKGVERR FK