| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1591 |
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| Symbol | |
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| ID | 5869371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1793388 |
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| End bp | 1798253 |
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| Gene Length | 4866 bp |
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| Protein Length | 1621 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546709 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001667832 |
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| Protein GI | 167032601 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.211689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCT TCACCGCAGC CAGCAAAGCC GACTTCCAGC ATCAACTGCA AGCGGCCCTG
GCGCAGCACA TCAGCGAACA GTCCCTGCCA CAAGTGACGC TGTTCGCCGA GCAGTTCTTC
GGCATCATCT CTCTGGACGA ACTCACCCAG CGCAGGCTTT CCGACCTGGC CGGCTGCACC
CTGTCAGCCT GGCGCATCAT CGAGCGTTTC GACCCCGAGT ACCCGCAAGT GCGCGTGTAC
AACCCTGATT ACGAACGCAA CGGCTGGCAA TCGACCCATA CCGTGGTCGA GGTGCTGCAC
CACGACCTGC CGTTCCTGGT CGACTCGGTG CGCACCGAGC TCAACCGCCG CGGCTACAGT
ATCCACACCC TGCAGACCAC CGTGCTCAGC GTGCGCCGTG GTGCCAAGGG CGAGCTGCTT
GAACTGCTGC CCAAGGGCAC CCAGGGCGAG GGCGTGCGCC ACGAGTCGCT GATGTACCTG
GAGATCGACC GCTGCGCCAA CGCCGCCGAG CTGACGGTGC TGACCCGAGA AATCGAGCAG
GTGCTGGCCG AAGTACGGGT GGCAGTGGCC GACTTCGAAC CGATGAAGGC CAAGCTGCGT
GAAGTGGTGG CGCAAGTGGA GCAGACCGCC TTTGGCCCAG CGCAACACGA AAAGGGCGAA
GTCAAAGCCT TCCTCGAATG GCTGCTGGAT AACCACTTCA CCTTCCTGGG CTATGAAGAG
TTCACCGTCA AGGGCGACGC CGATGGCGGC CAGATGGTGT ACGACGAGCA GTCGTTCCTT
GGCCTGCCGC GCCGCCTGCG TGTGGGCCTG ACGACAGAAG AGCTGCGCAT CGAAGACTAC
GCCGTGGCCT ACCTCAACGA GCCGCTGCTG CTGTCGTTCG CCAAGGCTGC ACTGCCCAGC
CGCGTACACC GCCCGGCCTA CCCTGACTAC GTGTCGATCC GCCAGCTGGA TGCCGATGGC
AAGGTGGTCA AGGAACACCG CTTCATGGGC CTGTACACCT CGTCGGTGTA TGGCGAAAGC
GTGCATGCCA TTCCGTACAT CCGCGTGAAG GTGGCCGAAG TCGAGCGCCG CTCGGGCTTC
GATCCCAAGG CCCACCTGGG CAAGGAACTG GCGCAGGTGC TGGAAGTGCT GCCGCGCGAC
GACCTGTTCC AGACACCAAT CGATGAGCTG TTCAGCACGG TCATGGCGAT CGTGCAGATC
CAGGAGCGCA ACAAGATCCG CGTGTTCCTG CGCAAGGACC CGTACGGCCG CTTCTGCTAC
TGCCTGGCTT ACGTACCAAG GGAAATCTAT TCCACCGAAG TGCGGCAGAA GATCCAGCAG
GTGCTGATGG AGCGCCTGAA GGCCAGCGAC TGTGAGTTCT GGACCTTCTT CTCCGAATCG
GTACTGGCCC GTGTGCAACT GATTCTACGG GTCGACCCAA AGAACCGCAT CGACATCGAC
CCGCAGCAGC TCGAGCGTGA AGTGGTCCAG GCGTGCCGCT CGTGGCATGA CGACTACTCG
GCGCTGGTGG TGGAGAACTT CGGCGAAGCC CAGGGCACCA ACATCCTCGC CGACTTCCCC
AAAGGCTTCC CGGCCGGTTA CCGCGAGCGC TTCGCCGCGC ACTCGGCCGT GGTCGACCTG
CAGCATGTGC TGAACCTGTC TGAAAGCAAG CCACTGGCGA TGAGCTTCTA CCAGCCGCTG
ACCCAAGTGG GTGAGCGCAT CCTGCACTGC AAGCTGTACC ACGCCGACAC CCCGCTGGCG
CTGTCCGATG TGCTGCCGAT CCTGGAAAAC CTTGGCCTGC GCGTGCTTGG CGAGTTCCCC
TACCGCCTGC GCCATGCCAA TGGCCGCGAG TACTGGATCC ACGACTTCGC CTTCACCTAC
AGCGAAGGCC TGAGCCTGGA TATCCAGCAG CTCAACGACA CCCTGCAGGA TGCCTTCATC
CATATCGTGC GCGGTGACGC CGAAAACGAC GCCTTCAACC GCCTGGTGCT GACTGCCGGC
CTGCCGTGGC GCGACGTGGC GCTGCTGCGC GCGTACGCCC GTTACCTGAA GCAGATCCGC
CTGGGCTTCG ACCTGGGTTA CATCGCCAGC ACCCTGAACA ACCACACCGA CATCGCCCGC
GAGCTGACCC GGTTGTTCAA GACCCGCTTC TACCTGGCGC GCAAGCTCAC CCAGGACGAC
CTGGACGACA AGCAGCAGCG CCTGGAACAG GCCATCCTGA CCGCGCTGGA CGATGTCCAG
GTGCTCAACG AAGACCGCAT CCTGCGGCGC TACCTGGACC TGATCAAGGC CACCCTGCGC
ACCAACTTCT ACCAGCCGGA TGCCAACGGC CAGAACAAGT CGTACTTCAG CTTCAAGTTC
AACCCCAAAC TGATCCCCGA ACTGCCCAAA CCGGTGCCCA AGTTCGAGAT TTTCGTCTAT
TCACCGCGCG TAGAGGGCGT GCACCTGCGC TTTGGCAACG TTGCCCGCGG GGGCCTGCGC
TGGTCCGACC GCGAAGAAGA CTTCCGCACC GAAGTGCTGG GCCTGGTCAA AGCCCAGCAG
GTGAAGAACT CGGTGATCGT GCCGGTTGGC GCCAAAGGCG GCTTCCTGCC GCGTCGTCTG
CCGCTGGGCG GCGGCCGTGA CGAGATCGCC GCCGAAGGCG TGGCGTGCTA CCGCATCTTC
ATTTCCGGCC TGCTCGACAT CACCGACAAC CTCAAGGACG GTGGCGTGGT GCCGCCGGCC
AACGTGGTGC GTCACGACGA TGACGACCCG TACCTGGTGG TGGCGGCCGA CAAGGGCACC
GCGACCTTCT CCGACATCGC CAACGGCATC GCCATCGACT ACGGCTTCTG GCTGGGTGAT
GCCTTTGCCT CGGGCGGCTC GGCCGGTTAC GACCACAAGA AGATGGGCAT CACCGCACGT
GGCGCCTGGG TGGGCGTGCA GCGCCACTTC CGCGAGCGCG GCATCAACGT GCAGGAAGAC
CCGATCACCG TCATCGGCGT GGGCGACATG GCCGGCGATG TGTTCGGCAA CGGCCTGCTG
ATGTCCGACA AGTTGCAGCT GGTGGCGGCG TTCAACCACC TGCATATCTT CATCGACCCG
AATCCTGAGC CGGCATCGAG CTTCGCTGAG CGCAAGCGCC TGTTCGACCT GCCGCGTTCG
GCCTGGAGCG ATTACGACAC CAGCATCATG TCCGAAGGCG GCGGGATCTT CCCGCGCAGT
GCCAAAAGCA TCGCCATCAG CCCGCAGATG AAAGAGCGCT TCGCCATCGA AGCCGACCGC
CTGACCCCGA CCGAGCTGCT GAACGCGCTG CTGAAGGCGC CGGTGGACCT GCTGTGGAAC
GGCGGTATCG GTACCTATGT GAAGGCCAGC AGCGAAAGCC ACGCCGATGT TGGCGACAAG
GCCAACGATG CACTGCGGGT CAATGGCAAC GAACTGCGCT GCAAGGTGGT GGGCGAGGGC
GGCAACCTGG GCATGACCCA GCTTGGCCGG GTCGAATTCG GCCTGAACGG CGGCGCCACC
AATACCGACT TCATCGACAA CGCCGGCGGC GTGGACTGCT CCGACCACGA GGTCAACATC
AAGATCCTGC TCAACGAAGT GGTGCAGGGT GGCGACATGA CCGAGAAGCA GCGCAACCAG
CTGCTGGGTA GCATGACCGA TGAAGTGGCC GGCCTGGTGC TGGGCAACAA CTACAAGCAG
ACCCAGGCGC TGTCGCTGGC GGCCCGCCGT GCCCGTGAGC GGATTGCCGA ATACAAGCGC
CTGATGGCCG ACCTGGAATC GCGTGGCAAG CTGGACCGCG CCATCGAGTT CCTGCCGTCC
GAAGAACAGC TGGCCGAGCG CCTGGCCGCC GGCCAGGGCC TGACCCGCGC CGAGCTGTCG
GTGCTGATCT CGTACAGCAA GATCGACCTC AAGGAGCAAC TGCTCAAGTC GCTGGTGCCG
GACGACGACT ACCTGACCCG CGACATGGAA ACCGCCTTCC CACCGTCGTT GGTCAGCAAG
TTCGCCGAGG CCATGCGCCG CCATCGCCTG AAGCGCGAAA TCGTCAGCAC CCAGATCGCC
AACGACCTGG TCAACAACAT GGGCATCACC TTCGTCCAGC GCCTGAAGGA GTCGACCGGG
ATGAGCCCGG CCAACGTTGC AGGGGCCTAT GTGATCGTGC GCGATATCTT CCACCTGCCG
CACTGGTTCC GCCAGATCGA GGCACTGGAC TACCAGGTGC CGGCAGAAAT CCAGCTCACC
CTGATGGACG AGCTGATGCG CCTGGGGCGT CGTGCCACGC GCTGGTTCTT GCGTAGTCGC
CGCAACGAAC AGGACGCCGG GCGCGACACC GCGCACTTCG GGCCGAAGAT CGCGCAACTG
GGGCTCAAGC TGGACGAGCT GCTCGAAGGC CCGACCCGCG AGCGCTGGAT GGTGCGCTAT
CAGGGCTTCG TCGAGGCCGG TGTGCCGGAG TTGCTGGCGC GCATGGTGGC CGGTACCAGC
CACCTGTACA CCCTGCTGCC GATCATCGAA GCGGCCGACG TCACCGGCCA TGATCCGGCG
CAGGTGGCCA AGGCGTTCTT CGCCGTGGGC AGCTCGCTGG ACCTGACCTG GTACCTGCAG
GAAATCAGCA ACCTGCCGGT GGAAAACAAC TGGCAGGCGC TGGCCCGCGA GGCGTTCCGC
GACGACATCG ACCTTCAGCA GCGGGCGATC ACCATCTCGG TACTGCAGAT GGCCGATGCC
CCGCAAGACA TGGACGCCCG TGTGGCACTG TGGGCCGAGC AGCATCGGGT GATGGTGGAG
CGCTGGCGCG CCATGCTCGA CGACCTGCGC AATGCCACTG GCACCGACTA TGCGATGTAC
GCGGTGGCCA ACCGCGAGCT GGTCGACCTG GCCATGAGCG GGCAGGCGGC GGTGGTGCCG
TCCTGA
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| Protein sequence | MAFFTAASKA DFQHQLQAAL AQHISEQSLP QVTLFAEQFF GIISLDELTQ RRLSDLAGCT
LSAWRIIERF DPEYPQVRVY NPDYERNGWQ STHTVVEVLH HDLPFLVDSV RTELNRRGYS
IHTLQTTVLS VRRGAKGELL ELLPKGTQGE GVRHESLMYL EIDRCANAAE LTVLTREIEQ
VLAEVRVAVA DFEPMKAKLR EVVAQVEQTA FGPAQHEKGE VKAFLEWLLD NHFTFLGYEE
FTVKGDADGG QMVYDEQSFL GLPRRLRVGL TTEELRIEDY AVAYLNEPLL LSFAKAALPS
RVHRPAYPDY VSIRQLDADG KVVKEHRFMG LYTSSVYGES VHAIPYIRVK VAEVERRSGF
DPKAHLGKEL AQVLEVLPRD DLFQTPIDEL FSTVMAIVQI QERNKIRVFL RKDPYGRFCY
CLAYVPREIY STEVRQKIQQ VLMERLKASD CEFWTFFSES VLARVQLILR VDPKNRIDID
PQQLEREVVQ ACRSWHDDYS ALVVENFGEA QGTNILADFP KGFPAGYRER FAAHSAVVDL
QHVLNLSESK PLAMSFYQPL TQVGERILHC KLYHADTPLA LSDVLPILEN LGLRVLGEFP
YRLRHANGRE YWIHDFAFTY SEGLSLDIQQ LNDTLQDAFI HIVRGDAEND AFNRLVLTAG
LPWRDVALLR AYARYLKQIR LGFDLGYIAS TLNNHTDIAR ELTRLFKTRF YLARKLTQDD
LDDKQQRLEQ AILTALDDVQ VLNEDRILRR YLDLIKATLR TNFYQPDANG QNKSYFSFKF
NPKLIPELPK PVPKFEIFVY SPRVEGVHLR FGNVARGGLR WSDREEDFRT EVLGLVKAQQ
VKNSVIVPVG AKGGFLPRRL PLGGGRDEIA AEGVACYRIF ISGLLDITDN LKDGGVVPPA
NVVRHDDDDP YLVVAADKGT ATFSDIANGI AIDYGFWLGD AFASGGSAGY DHKKMGITAR
GAWVGVQRHF RERGINVQED PITVIGVGDM AGDVFGNGLL MSDKLQLVAA FNHLHIFIDP
NPEPASSFAE RKRLFDLPRS AWSDYDTSIM SEGGGIFPRS AKSIAISPQM KERFAIEADR
LTPTELLNAL LKAPVDLLWN GGIGTYVKAS SESHADVGDK ANDALRVNGN ELRCKVVGEG
GNLGMTQLGR VEFGLNGGAT NTDFIDNAGG VDCSDHEVNI KILLNEVVQG GDMTEKQRNQ
LLGSMTDEVA GLVLGNNYKQ TQALSLAARR ARERIAEYKR LMADLESRGK LDRAIEFLPS
EEQLAERLAA GQGLTRAELS VLISYSKIDL KEQLLKSLVP DDDYLTRDME TAFPPSLVSK
FAEAMRRHRL KREIVSTQIA NDLVNNMGIT FVQRLKESTG MSPANVAGAY VIVRDIFHLP
HWFRQIEALD YQVPAEIQLT LMDELMRLGR RATRWFLRSR RNEQDAGRDT AHFGPKIAQL
GLKLDELLEG PTRERWMVRY QGFVEAGVPE LLARMVAGTS HLYTLLPIIE AADVTGHDPA
QVAKAFFAVG SSLDLTWYLQ EISNLPVENN WQALAREAFR DDIDLQQRAI TISVLQMADA
PQDMDARVAL WAEQHRVMVE RWRAMLDDLR NATGTDYAMY AVANRELVDL AMSGQAAVVP
S
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