Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1573 |
Symbol | |
ID | 5869353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1772320 |
End bp | 1773213 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546691 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001667814 |
Protein GI | 167032583 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.117572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.71184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATATG AGCTGCAAGA CATCAGATCT TTCGTGAAAA TCGCCGAACT CGGCAGTTTC CACGAAGCCG CCGAAGCACT TCACCTGTCC CAGCCGGCCT TGAGCCGGCG GATCAAGAAG CTGGAGGAAG GCCTGGGCAC CTCGCTACTG GAGCGCACCA CCCGCCGGGT CAGCCTGACC AGCGTGGGCC GCGACTTCCT GCCCAAGGCC AGGCGCCTGC TGGATGATTT TGAAGACTCG ATCCTCAGCA TTCGCGAGCT GGCCGAGCGC CAGACCGGCC AGGTTACCCT TGCTTGCATC CCCACCGCAG CGTTCTACTT CCTGCCGTCG GTGATCCGCG ATTACAACGA GCAATACCCG AAAATCCGCA TTCGCCTGCT GGACCTTAGC GCCAACGACG GGCTCGAAGC CGTGCTGCGC GGCGAGGCCG ATTTCGGCAT CAACATGATG AGCGGCCAGC ACCCGGACAT CGAGTTTGTC ACACTGGTGC AAGAGCACTT TGTGCTGGCC TGCAGGCGCG ACCACCCACT GGCGAACCGG GCCTCCGTTA CCTGGACGGA ACTGGCTGAC TACCGCCTGA TCGGCGTCGG CCGCCTGAGC GGCAACCGCA TGCTACTGGA CCACGCGTTG TCCGGGCTCA ACCTGCGACC CAAATGGTTC TACGAAGTGC AACACCTGTC CACGTCGCTG GGCATGGTCG AGGCCGGGCT GGGTGTGTCC GCCATGCCCA GCCTGGCCAT GCCCGACGCC GACCACCCGA CGCTGGTCAG CGTGCCGCTG ATCGAGCCGC AGGTTAGCCG CACGCTGGGG TTGGTATACC GGCGCGGCGC ATCGTTGTCG CCTGCGGCGG AGAAGTTCGT TTCGATCTTG CTGGAGAAAT GGACCAATCG CTGA
|
Protein sequence | MEYELQDIRS FVKIAELGSF HEAAEALHLS QPALSRRIKK LEEGLGTSLL ERTTRRVSLT SVGRDFLPKA RRLLDDFEDS ILSIRELAER QTGQVTLACI PTAAFYFLPS VIRDYNEQYP KIRIRLLDLS ANDGLEAVLR GEADFGINMM SGQHPDIEFV TLVQEHFVLA CRRDHPLANR ASVTWTELAD YRLIGVGRLS GNRMLLDHAL SGLNLRPKWF YEVQHLSTSL GMVEAGLGVS AMPSLAMPDA DHPTLVSVPL IEPQVSRTLG LVYRRGASLS PAAEKFVSIL LEKWTNR
|
| |