| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1566 |
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| Symbol | |
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| ID | 5869346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1764338 |
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| End bp | 1765555 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546684 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001667807 |
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| Protein GI | 167032576 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.646941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAG CTGGCCCCAA GCTACTCACT CAAATTGCTG CCGTGCACTT CGTCAGCCAT
GTACACATCA TGCTGATCCC GGCGCTACTG CCCGTGCTGC CTGGCCTGCT GGGGGTGGGT
TTCGTCGAGC TCGGCGTAGC CCTGGCGGTG TTCAACATCG TTTCGGCCCT GGTACAGGCC
CCGCTGGGTT ATGCCGTCGA CCACTATGGA GCGCGTAAAG TGCTCAAGGC CGGGCTGTTG
CTGGGCAGCC TCAGCTTCCT GCTGCTGGCG GCCAGCCCCA GTCACGCGGT ATTGCTGGTG
GCAATGGCCA TGGCCGGCCT GGCCAATGGC GTGTATCACC CGGCAGACTA TGCACTGCTG
GCCAATGGCA TCGAGCCGGC ACGCCTGGGG CGGTCGTTCT CTGTTCATAC CTTCGCCGGC
TTCCTCGGCT CGGCAGTTAC GCCGGCACTT TTCCTCGGCA TCGCCACCGT GTTCGGCACA
CCGGCAGCCC TGGCGGTGGG CGCGGTGTTC GGGGTAGCTG CGCTGCTGCT GATATCGATA
CCGGGCAGTG GCGTGTACCA GGCCGCCAGG CCTTGCAACA AAGAAGGCGC AGGCCTGGCG
CCAACAACAG GCCGCCTGCG CGTGTTCACA CCGATGATCG GCGTGCTGAC GGTGTTGTTC
ATCCTGCTCA ACCTGAGCAC CAGTGCCATC GAGAAGTTTT CCGTAGCCGC CCTGATTCAG
GGCCAAGGCC TGACACTGGC CTGGGCCAAC ACCGCACTCA CCGCTTTCCT GCTGTGCAGC
GCTGCCGGTG TACTGTGCGG TGGCGCCTTG GCCGACCGTA CCCGGCGCCA CGGTCTGGTG
GCGGCGCTGG CCTTCGCACT GGCAGCGGCA CTGACCGCGC TGGTGGCCCT GGGGCTGCTG
CAGGGCTGGG CACTGGTGGT TGTATTGGGC GCCATTGGCC TGCTGACCGG GGTCATCGCC
CCATCGCGGG ACATGCTGGT CAAGGCGGCG GCGCCGCCAG GTGCCGAGGG CAAAACCTTC
GGGCTGGTGT CGACCGGGTT CAACATCGGC GGCGCCCTCG GGCCGGTGGC GTTCGGCTGG
ATGCTCGACC AGCACCTGCC CAACGGGGTT TTCATCGCAT CGGTCATGTT CATGCTGCTG
ACGGTGCTGC TGACGCTGGC GCAGGAGGCG TACCTGGCCA GGGCCCGCAA CGCTGAACGA
CTGGCGCGCA CCCTGTAG
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| Protein sequence | MPQAGPKLLT QIAAVHFVSH VHIMLIPALL PVLPGLLGVG FVELGVALAV FNIVSALVQA
PLGYAVDHYG ARKVLKAGLL LGSLSFLLLA ASPSHAVLLV AMAMAGLANG VYHPADYALL
ANGIEPARLG RSFSVHTFAG FLGSAVTPAL FLGIATVFGT PAALAVGAVF GVAALLLISI
PGSGVYQAAR PCNKEGAGLA PTTGRLRVFT PMIGVLTVLF ILLNLSTSAI EKFSVAALIQ
GQGLTLAWAN TALTAFLLCS AAGVLCGGAL ADRTRRHGLV AALAFALAAA LTALVALGLL
QGWALVVVLG AIGLLTGVIA PSRDMLVKAA APPGAEGKTF GLVSTGFNIG GALGPVAFGW
MLDQHLPNGV FIASVMFMLL TVLLTLAQEA YLARARNAER LARTL
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