Gene PputGB1_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1561 
Symbol 
ID5869341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1759303 
End bp1760379 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID641546679 
Productvon Willebrand factor type A 
Protein accessionYP_001667802 
Protein GI167032571 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.604958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC TGGCCTGGCC GTGGGTCTTC GCCCTGTTGC CGCTGCCTTG GCTGGCGCGC 
CTGCTGCTGC CGGCCGCCGA CAGTGGCGAG CCGGTACTCA AGGTAGGCTT CCTCAGTGAA
CTGGAAGGCC TGGCCGGGCG CCGTGCGCGG CTTAACCTGC CAACCTGGCG CCAGCAGGCG
CCGTTCGTCG TCATCTGGCT GCTGCTGCTG TGCGCTGCTG CTCGCCCGCA ATGGCTGGGC
GAACCGGTGC CAGTGGCCGC CAGCGGCCGC GACCTGCTGG TAGCGGTAGA CGTGTCCGGG
TCGATGGACT TCCCCGACAT GCAGTGGAAA AACGAAGACA TCAGCCGCCT CGACCTGGTC
AAAGCGCTGA TGGGCGATTT TCTGCAAGAC CGTGAAGGCG ACCGCGTGGG GCTGATCCTG
TTCGGCAGCC AGGCGTACTT GCAGGCGCCG CTCACCTTCG ACCGACGCAC CGTGCGCACC
TTCCTCGACG AAGCGAAAAT CGGTATCGCC GGCAAGAACA CCGCCATCGG CGACGCCATT
GGCCTGGCGG TCAAACGCCT GCGCCAACGC CCGGCTCAAA GCCGAGTGCT GGTGCTGATC
ACCGACGGTG CCAACAACGG CGGGCAGATC CACCCACTGA CCGCCGCCCG CCTGGCGGCC
CAGGAAGGGG TACGCATCTA CACCATCGGT ATCGGCGCCA ACCCCGAAGC CAGTGGCACC
CCCGGCCTGC TCGGCCTCAA CCCGAGCCTG GACCTGGACG AGGCCGCCCT CAAGGAAATT
GCCGACATCA CCCACGGTGC ATACTTCCGC GCCCATGACG GCGCCGAGCT GGACGCCATC
GGCGACACCC TCGACCAGCT GGAGCCGGTG GCCCAGCAAC CGACCCAAGC CCGCACTGCT
CAGGCCCTGT ACGCCTGGCC ATTGGCCCTG GCGCTGCTGC TCAGCGTGCT ACTGGCAGTG
GCCGTGCAGT GGCCCGACAA CCTGCTGCAA CGCCTGCTGC GCAAGCCGCG TTTCCTGCAG
CCGCACCCCG AATGGCGCCA GCGTTTGAAG CGCCTGCGCT TGAGGAGGCG GCGATGA
 
Protein sequence
MFELAWPWVF ALLPLPWLAR LLLPAADSGE PVLKVGFLSE LEGLAGRRAR LNLPTWRQQA 
PFVVIWLLLL CAAARPQWLG EPVPVAASGR DLLVAVDVSG SMDFPDMQWK NEDISRLDLV
KALMGDFLQD REGDRVGLIL FGSQAYLQAP LTFDRRTVRT FLDEAKIGIA GKNTAIGDAI
GLAVKRLRQR PAQSRVLVLI TDGANNGGQI HPLTAARLAA QEGVRIYTIG IGANPEASGT
PGLLGLNPSL DLDEAALKEI ADITHGAYFR AHDGAELDAI GDTLDQLEPV AQQPTQARTA
QALYAWPLAL ALLLSVLLAV AVQWPDNLLQ RLLRKPRFLQ PHPEWRQRLK RLRLRRRR