| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1556 |
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| Symbol | |
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| ID | 5869336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1750057 |
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| End bp | 1753701 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546674 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001667797 |
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| Protein GI | 167032566 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.291963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TCGCCATCCG CCTGAAGAAC CTGGCATCGC TGGCCGGCCC GGTCGAAATT
GACTTCACCG CAGAACCCTT GGCCAGCGCG GGCCTGTTCG CCATCACCGG GCCGACCGGT
GCCGGCAAGA GCACCCTGCT CGACGCCTTG TGCCTGGCGT TGTTTGGCAC CGTGCCACGG
CTCAATGACA TCGGCCGAGA GGCCAAGGTG CCGGATGCCG ACGGCGAAAT CCCCACGTCA
GACCCGCGCA ACCTGCTGCG CCGTGGCACC GGCAGCGGTT TTGCCGAGGT CGATTTCGTC
GGCATCGATG GCCGCCGCTA CCGTGCCCGC TGGGAAGCCA ACCGCGCCCG CGACAAAGCC
AACGGCAAAC TGCAACTTAG CCGCCAGAGC CTCTACGATC TCGACAGCGA GCAAGTACTG
GCCAGCGCCA AGAACGAGTT CAAGCCACTG GTCGAGGCCA GTCTGGGCCT GAACTTCGAG
CAGTTCACCC GTGCAGTGAT GCTGGCCCAG AGCGAGTTCG GCGCGTTCCT CAAGGCCGAC
GACAAAGAGC GCAGCGAACT GCTGGAAAAG CTCACCAACA CCGCCATCTA CACCCGCCTG
GGCCAGCGCG CCTTCAGCAA GGCGCGTGAA GCCGGCGAGG CGCACAAAGC CCTGAATGAC
CGCGCCAGCC ACTTGTTGCC GATGGCCGTC GAAGCCCGTA CCGAGCTCGA CCAACGCCTG
GAGCAGGCGC AGCAACAGTT CAAGGCCGAC CAAACCGGCG AGCGCCAACT TGAGCAGCAA
CGCAGCTGGC TGAATGAGCA ACGCCAGCTG CAAGCCCAGC ACGTCGAAGC CGGCACCGCA
CTGCAGGCCG CTGAACAGGG CTGGCAGTTG CTGGCCGAAC CCCGCCTGGA CTTGGTACGC
CTGGAGCGCC TGGCGCCACA ACGTCACCAA TTTCATCGCC AACAGGCACT CAGCGCACAA
CTGGCGCCAG TGGCCGCGAA AATTGCCGAG CAGCAACAGC AGCAAGACGC ACTGCAGGTG
CGTACCCACG AGCTGGAGCA GGCGCTGAAC GCTGCCCGCC AAGCGCTGGC CGATCGCCAG
GCCCAGCATG GCGAAAACAC CCCACGCCTG CGCCAGGCCT TTGCCGCCCA GGACAACCTG
GCCCGCCTGG ACCAGGAGTT GGCCGCCCAG CGCAGCAGCA ACCAACAGGC TGAACAGCAA
GTCGCTGACG GCCAGCAGCA GCTGCAGCAG TTGGAAGACA ATCAGCAGCG CAGCCTGCAG
CAACTGGCAC AGATCGACAC CGCGCTTGCC GACAGTCAGC ACCTGGCGGG CCTGGCCGAT
GCCTGGCACG CCTACTTGCC GCAACTTAAA CAGGTGATGC TGATAGGCGG CCGCCTGAGC
AAAGGCCGCG ACGAGCTGCC CGGCCTGCAG GCCCTGGCCA GCCAGGCCAA TGCACACTTG
CAGGCCGAGC GTGACGCCTA CGACCTGCTG TTCCGCGAGG CCAAGGCCGA ACCACAGGCC
CTTGCCGAGC AGATCGACCT GCTGGGCGGC ATGCTGCAGG ACAACCGCAA GCAGCAGCGC
GCCGTCGAGG AACTGTCGCG CCTGCACGCC CGTGAACGGG AGCTGCGCCA GCAGTTGGAC
GCCGCGCGCG AACGGCAGCA GCAGGCCATG CAGCAGCGCC AGCAGCTGAT TACCGAGGGC
ACCGCCGCCA AGGCCGAGCT GGAGGCCGCC GAACAGGCGC TCACCCTCAC CCGCCAGTTG
CTGGAGCGCC AGCGCCTGGC ACGCAACACC AGCGTCGAAG AACTGCGTGG CCAATTGCGC
GACGGCGAAC CCTGCCCGGT ATGCGGCAGC GCCGAACACC CGTTCCATCA GCCCGAAGCG
CTGCTGCAGA GCCTGGGCCG CCATGACCAG GCCGAAGAAG ACGCCGCCCA GAAACAGGTC
GAAAGCCTCA ACAGCAAACT GGTGGAGCTT CGTACCCAGC TGGGTGTGGT CAATGCTCAA
CTCAAGGACT ACCAGCAGCA ACAGCAACAC CTGAGCGAAC AGCTGCAGCC AATAGTGGCC
CAGGTACAGG CGCACAGCCT GTGGCCTGCC CTCGCCCCGC AGGACGACAT CGCCCGTAGC
ACCTGGCTCG ACAGCCAACT GCGGCGCCTG GACGAACACA TCGGCCAGGA CGAGAAGCGC
CAAAAAGTCC TGCTAGCCCT ACAAAAAGAC GCCGCCCGCC TCAACCAGCA ACTGCAGGCC
GCCCACGACG CCCAGCAGCA GGCCCAGCGC CACCTGGAGC AACAGCACCA GGCCCTGGCC
AACGATGAGC AGCAGTTGCA GCAAGGCCTG AGCGACCTGG CCGGGGTTCT GCCCGAGGAA
GCCCTCAAGG CCCTGAACGA AGACCCGGCC AATGCCTTCC TGGCCCTTGA CCAGCAAATT
GCCCTGCGCC GGCAACACCT GGAACAGCGC AAGGACGAAC AGGAAGAACA GCAAGCCCGC
CAAACCCAGC TGGACAAACT GCGCGACCAA CAACAGGCGC GCGTGCAAGG CCAGCAGCAG
TTGCAACAAA AGCTGGCTAC CCTCGACGAG CAACGCCAGC AAGCCCAGGC CTCGCTCGGC
GAGCTGCTCG GCGAACATGC CAGCGCCGAA GCCTGGCAAC AGCACATGGA CACCGCGCTG
GAGCAAGCCC GTGCCCTTGA CGCCGACACC GCCCAGCGCC TGCAGGAACT GCGCACCCAG
GGCGTACAAC TGGCCAGCGA GCTCAAGGCC AATGCCCAGC AGCAACAGGC GCTGACCAGC
GAATGCCAGC AGTTGCAGGG CCAGATCACC CAATGGCGCA GCGAGCACCC GGAACTGGAT
GACGCCGGGC TGGACCGCCT GCTGGGCATG GATGATGCCC AGGTGAATGA ACTGCGCCAG
CGCCTGCAAA ACGCTGAAAA GGCCATCGAA CAAGGCCGGG TGCTGCTGCA GGAACGTGAG
CAGCGCCTGC AGCAGCACGC CGCGCAAATG ACCGTGGACA CCTCGGTCGA AGCCCTGGAG
CAAGCCCTGA CCGAGCTACG CGAGCGCCTG ACCCTGCACG AGCAACAGTG CGCAGAATTG
CGCGCGCTGC AGGCCGACGA CCAGCGCCGG CAGCAGGCCC ACCAAGCACT GGCGGCAGAA
ATCGATGAGG CTCGCCAGCA ATGGCAACGC TGGGGTCGCC TGAATGACCT GATCGGTTCG
GCTTCGGGCG ACGTGTTCCG CAAGATTGCC CAAGGCTACA ACCTCGACCT GCTGCTGCAC
CACGCCAACG CCCAGCTACG CCAGCTGGCC CGCCGCTACC GCCTCAAGCG CGGCGGCAGT
GCCCTGGGCC TGCTGGTACT GGATACCGAG ATGGGCGACG AACTGCGTTC GGTGCACTCG
TTGTCGGGCG GGGAAACCTT CCTGGTATCG CTGGCCCTGG CCCTGGGCCT GGCGTCAATG
GCCTCCAGCA CCCTGCGCAT CGAATCGCTG TTCATCGACG AAGGCTTCGG CAGCCTCGAC
CCCGAGTCGT TGCAACTTGC CATGGACGCC CTCGACGGCT TGCAGGCCCA AGGCCGCAAG
GTGGCGGTGA TTTCCCACGT GCAGGAAATG CACGAGCGCA TCCCGGTGCA GATCCAGGTG
CGGCGCCAGG GTAATGGCCT GAGTGACGTG GAGGTGTGTG GGTGA
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| Protein sequence | MKILAIRLKN LASLAGPVEI DFTAEPLASA GLFAITGPTG AGKSTLLDAL CLALFGTVPR
LNDIGREAKV PDADGEIPTS DPRNLLRRGT GSGFAEVDFV GIDGRRYRAR WEANRARDKA
NGKLQLSRQS LYDLDSEQVL ASAKNEFKPL VEASLGLNFE QFTRAVMLAQ SEFGAFLKAD
DKERSELLEK LTNTAIYTRL GQRAFSKARE AGEAHKALND RASHLLPMAV EARTELDQRL
EQAQQQFKAD QTGERQLEQQ RSWLNEQRQL QAQHVEAGTA LQAAEQGWQL LAEPRLDLVR
LERLAPQRHQ FHRQQALSAQ LAPVAAKIAE QQQQQDALQV RTHELEQALN AARQALADRQ
AQHGENTPRL RQAFAAQDNL ARLDQELAAQ RSSNQQAEQQ VADGQQQLQQ LEDNQQRSLQ
QLAQIDTALA DSQHLAGLAD AWHAYLPQLK QVMLIGGRLS KGRDELPGLQ ALASQANAHL
QAERDAYDLL FREAKAEPQA LAEQIDLLGG MLQDNRKQQR AVEELSRLHA RERELRQQLD
AARERQQQAM QQRQQLITEG TAAKAELEAA EQALTLTRQL LERQRLARNT SVEELRGQLR
DGEPCPVCGS AEHPFHQPEA LLQSLGRHDQ AEEDAAQKQV ESLNSKLVEL RTQLGVVNAQ
LKDYQQQQQH LSEQLQPIVA QVQAHSLWPA LAPQDDIARS TWLDSQLRRL DEHIGQDEKR
QKVLLALQKD AARLNQQLQA AHDAQQQAQR HLEQQHQALA NDEQQLQQGL SDLAGVLPEE
ALKALNEDPA NAFLALDQQI ALRRQHLEQR KDEQEEQQAR QTQLDKLRDQ QQARVQGQQQ
LQQKLATLDE QRQQAQASLG ELLGEHASAE AWQQHMDTAL EQARALDADT AQRLQELRTQ
GVQLASELKA NAQQQQALTS ECQQLQGQIT QWRSEHPELD DAGLDRLLGM DDAQVNELRQ
RLQNAEKAIE QGRVLLQERE QRLQQHAAQM TVDTSVEALE QALTELRERL TLHEQQCAEL
RALQADDQRR QQAHQALAAE IDEARQQWQR WGRLNDLIGS ASGDVFRKIA QGYNLDLLLH
HANAQLRQLA RRYRLKRGGS ALGLLVLDTE MGDELRSVHS LSGGETFLVS LALALGLASM
ASSTLRIESL FIDEGFGSLD PESLQLAMDA LDGLQAQGRK VAVISHVQEM HERIPVQIQV
RRQGNGLSDV EVCG
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