Gene PputGB1_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1542 
Symbol 
ID5869322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1735753 
End bp1736298 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content63% 
IMG OID641546660 
Productcytochrome B561 
Protein accessionYP_001667783 
Protein GI167032552 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.662748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.360468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCAT CCACCCCCGC GACCCATTAC GCACGCCTGT CCATCGCCCT GCATTGGCTG 
ATGCTGGTAC TGCTGGCCGC TGTCTACGCC CTTATCGAAC TGCGTGGCCT GTTCCCCAAG
GACAGCGCCG AACGCAACCT GATGAAGGAC CTGCACTTCA TGCTCGGGCT CAGCGTATTC
GTACTGGTCT GGCTGCGCCT GGCCATGCGC CTGAGCCGCC CGACCCCGCC CATCGTGCCC
AAGCCGCCAG CCTGGCAAAC CGGCCTTGCA CACCTGATGC ATTTGGCGCT TTACCTGCTG
ATGATCGGCC TGCCGCTGGC CGGCTGGCTG ATCCTCAGCG CCGCCGACAA ACCGGTGCCG
TTCTTCGGCC TGGAACTGCC GCACCTGATC GGCCCGAACC CGGACCAGGC CAAGTTCATC
AAGGGCTGGC ATGAACGTAT CGGCAGCTGG GGCTACTGGC TGATCGGCCT GCACGCACTG
GCCGGGCTGT ACCACCACTA TGTTCAGCGC GACAATACAC TGTTGCGCAT GCTGCCCTAC
AAGTAA
 
Protein sequence
MVSSTPATHY ARLSIALHWL MLVLLAAVYA LIELRGLFPK DSAERNLMKD LHFMLGLSVF 
VLVWLRLAMR LSRPTPPIVP KPPAWQTGLA HLMHLALYLL MIGLPLAGWL ILSAADKPVP
FFGLELPHLI GPNPDQAKFI KGWHERIGSW GYWLIGLHAL AGLYHHYVQR DNTLLRMLPY
K