| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1538 |
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| Symbol | |
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| ID | 5869318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1730380 |
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| End bp | 1731420 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546656 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001667779 |
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| Protein GI | 167032548 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.38751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCC CCCGCGTACG CCTCGGCGAC CTTTCAGTAG GCTTTGTCCA GCCGCTGACC
GAGGCCCTGC GCGAGCGGGG TCATGACCCC GAGCCCCTGC TGCTGCGCTA TGGCCTGGAT
GCCCCACGCC TTGCCGAAGC CGGCGCGCGC TTGTCGATCC CCCGCTACAT GCACCTGGGC
CACGCAGCCA TCGAGCTGAG CGGCGAAGCC GCACTCGGCC TGCACATGGG GCGCTTGAGC
CGCCTGGCAC ATGCCGGCCT GGCCGGAGTA ACCGCCGCCC AGGCCCCCAC CCTGGGCGAG
GCGGCGCGCA CGCTGCTGCG CTTCGAGCCC CTGTACGCGG CCAACTACCG TGGCCGTTCC
AGCTTCGTGG AAGATGCCCA GGGCGCTTGG TTGCGCTTCT ATTCCATCAG CCCCTACAAC
GCCTACAACC GCTTCGTGGT CGATTCACTG CTTGCCGGCT GGCTGGCGCA ACTTGCCGAC
CTGGCCGGCA TGGCGATACA GGCAGAACGC CTTAGCATCG AATTTTCCGC CCCCGCCTAT
GCTGCGCGCT ATCAGGCGCT GTGCAGCACG CCAGTGCAAT TCACGGCCGA AGCCAATCAA
CTGCGGCTAA GCCGCGCAAC ACTGCAACTA GCCAACCCCA GGCATTGCCC GAGCACCTGG
CAGCACCTGC TGCAACTGTG CGAAGCAGAG TTGCTACAGC GCACACGGGT ACGCAGCCTG
GGCGAGCGCA TCACCCATCT GCTGGGCCCG CTGCTCAATG GTGGCCGTGA ACCGGACCTG
GAAGAAGTGG CGCTGCACCT GCAGCTGCCA ACCTGGACCT TGCGTCGCAA ACTCGCCGAG
GAGGGCACGC GGTTTCGCGA CCTGCTCAAC GAAACACGGC GCGACCTGGC AGAGACCTAC
ATCCGTGACA CGGAGCTGGC CTTTGGCGAG ATTGCCTATC TGTTGGGGTT TGCTTCAGCC
GAGGCCTTCC AGCGCGCGTT CAAGCGCTGG ACGGGCCTCA CGCCGGGGGA GTTCCGCCGC
AGCCAGCGCC GGGCGGGTTA A
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| Protein sequence | MARPRVRLGD LSVGFVQPLT EALRERGHDP EPLLLRYGLD APRLAEAGAR LSIPRYMHLG
HAAIELSGEA ALGLHMGRLS RLAHAGLAGV TAAQAPTLGE AARTLLRFEP LYAANYRGRS
SFVEDAQGAW LRFYSISPYN AYNRFVVDSL LAGWLAQLAD LAGMAIQAER LSIEFSAPAY
AARYQALCST PVQFTAEANQ LRLSRATLQL ANPRHCPSTW QHLLQLCEAE LLQRTRVRSL
GERITHLLGP LLNGGREPDL EEVALHLQLP TWTLRRKLAE EGTRFRDLLN ETRRDLAETY
IRDTELAFGE IAYLLGFASA EAFQRAFKRW TGLTPGEFRR SQRRAG
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