| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1528 |
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| Symbol | truA |
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| ID | 5869304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1719480 |
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| End bp | 1720340 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546642 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001667769 |
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| Protein GI | 167032538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.141519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGG ACATCATCGA CACCGCTACC GCCGAATCCG CGGCCGAAGG CTTCTCCCGT
ATCGCCCTGG GCGTGGAATA CAAGGGCGCG CGCTACCGCG GCTGGCAGCG CCAGGCCAGC
GGTGTACCGA GTGTCCAGCA GGCCCTGGAA CAAGCCCTGT CCAAGGTTGC CAACGAGCCG
ATTTCGGTGA TTTGCGCCGG GCGTACCGAC GCCGGGGTCC ATGGCTGCGG GCAGATCGTG
CACTTCGACA CCCGTGCCGT GCGTGACGAG CGTGCCTGGA CCATGGGCAC CAACTTCAAC
CTGCCGCACG ACATCAGCGT GGTCTGGTCG CAGCCAATGC CGGCCGACTT CCATGCCCGC
TTCAAGGCCT GCGCCCGGCG CTACCGCTAT GTCATCTACA ACGACCCGAT CCGCCCGGCG
CACCTGGCCG AGGAAGTGAC CTGGAACCAC CGTCCGCTGG ACGTCGAGCG CATGGCCGAG
GCCGCGCAGT TTCTGCTCGG CACCCACGAC TTCAGCGCCT TCCGCGCCAG CCAGTGCCAG
GCCAAGTCAC CGATCAAGCA CATCTACCAC CTGCGCGTTA CCCGTCATGG CCAGATGATC
GTGCTGGACG TGCGTGCCAC CGCTTTTCTG CATCACATGG TGCGCAACAT TGCCGGTGTG
CTGATGGCCA TTGGCGCCGG TGAGCGCCCA GTCACCTGGG CGCGCGAGGT GCTCGAAGGG
CGTAACCGCC GCGAAGGTGG GGTAACCGCC CACCCGTACG GGCTTTATCT GGTGCAGGTG
GAGTACCCCG AGGAATTTGC GCTGCCCAAG CGTTACATCG GCCCACACTT TTTGAGCGGT
TACGAGGCGT TGGCAGACTG A
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| Protein sequence | MRLDIIDTAT AESAAEGFSR IALGVEYKGA RYRGWQRQAS GVPSVQQALE QALSKVANEP
ISVICAGRTD AGVHGCGQIV HFDTRAVRDE RAWTMGTNFN LPHDISVVWS QPMPADFHAR
FKACARRYRY VIYNDPIRPA HLAEEVTWNH RPLDVERMAE AAQFLLGTHD FSAFRASQCQ
AKSPIKHIYH LRVTRHGQMI VLDVRATAFL HHMVRNIAGV LMAIGAGERP VTWAREVLEG
RNRREGGVTA HPYGLYLVQV EYPEEFALPK RYIGPHFLSG YEALAD
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