| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1523 |
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| Symbol | |
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| ID | 5869299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1709904 |
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| End bp | 1713041 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641546637 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001667764 |
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| Protein GI | 167032533 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGG GAGCTTCAGG GCGTCTTGCC CCCCAACGTG GAACGCTGAG CCTGGGGATT
CAGCTGGCAC TGTTGGCCTG CTGCGGCGCC ACGCCGGTAC TGCCTGCCAT GGCCGCCACC
GACCCGGCTG GCGACGCACG CAGCCAGGCC GGCCAGTACC ATCAATTCGA TGTGAAGGGC
GGGGCACTTG AAGATGCCAT GTTGCAGCTG GCACGCCAGG CGGGCGCCGA GCTTTACCTG
ACCGGCGAGG CCTTCAATGG CCTGTACGCC AACCCGGTAC AGGGCCGTTT CTCTCTGGAA
GGTGCGCTCA AGCAATTGCT GAGTGGTTTG CCGATCAGCT TCAGCCTGAG TGGCGGGCCC
GACCGCCCGG TGATCCACCT GCAATCGGCC ACCAGCGCTG GCACCGATGA CCTTCACCCG
ACCTACGTGT ACGGCCAGCG TGACGGCCGC TCGCGGGACG AGAAGGGCTA CAGCGACATC
TACGACCAGG ACATTTCCAC CGTCTACGCC GGCAAGGAGC AGATCGAGCG CTACAAGGGC
GCCGCCCCCG CCGACGTGTT CAAGGGCATG CTCAACGTCT ACAGCGGCGA CGCCCGCAAC
AGTGGTGCGC TGGACCCGAA CGTACGTGGC ATCCAGGGCC CTGGGCGGGT GCCGCTGACC
ATCGACGGCA CCGAGCAGGC GCTGACCGTG TACCGCGGCT ACATGGGGGC CAACAACCGC
AACTACATCG ACCCCAACCT GATCGGTTCG ATCAAGGTAA TTAAGGGGCC GAACCTGGAG
CGCAATGTCT ACAGCGGCGT TGGTGGCGCG GTGGTGGTCA ATACCCTGAG CGTCGATGAC
ATCCTCAAGG AGGGCGAAGC ATTCGGCGGC GAGTTCAAGA TCGAGGGCAG CAACAATTCG
GTATCCCCGA AGCTGCCCAC ACTGATGACC GGGCAGATGC CCGGTGCGGA TTACCAGTAC
ATTCCGATCA ATTCGTACTA CGACCCGTCG CTGTACAAGC ACCCGCGTAC CAGTAGCAGC
AACGACCTGC TGTCGAGTGA CGACAAGGCC TATCGGTTGG CACTGGGTAC GCGCCAGGAG
CATTTCGACC TGATGGGCGC CTACGCCTAC CGGGAAAAGG GCAACCACTA CGCGGGCAAG
AAAAAGAGCA GTTACTACGC CAGTGGCGAG TTGGTGGATG GCAAGTGGGA CTACGTGCCC
AATCTGGCGC GCATCTACAA GCCTGGCGAT GAAGTACCGA ACAGTTCCAG CAAGATGGAG
TCGTGGCTGG CCAAGGCTAC CTGGAAGATC GACGAGGGCC AGCGCCTGGA ATTTGGCTAC
CGTGCCACTG ACTCGTTGTA TGGCGAGATC CTGCCCTCGC GTATTTCATT CTTCACGCCG
GGGAGTACCT ATGATGCCGC GACCTACGGC GTGCCGCAGT GGCCGCTGAG CCATGTAGAC
AGCAAGGCCT ATAACGTGGA GTACAAGCTC AACCCAGAAG ACAACCGCTG GGTCGACTTC
TACTCGAACT TGTGGATGAC CCGGACCGTC AGCGATACCT ACAGTTCGGG TGGCGTTCCC
AACGAAACCA CCGCGCAGAA TCCCGAATTT CGTAATACCG CTGTGGCCAA TGCCAAGCAT
GACCGAGCCG GGCTCACTGT CAGCAACAAG CTGAAGCTGC TGGACAGCCT CGACCTGACG
TTGGGCGGGA GCTACCAGCA TGAAAAGCTA AGTTCGGGCG ACAGCATCTA TGACCCGACC
ACGTTCTCGG CAACGCGTCT GTTTCCCAGG GCCGGGCGTC GCGAAGAGCA GGAATACAAC
TTCAACTTCG ATTGGCAGCC CGTTTCCTTT GCACGCTTCA CAGCGGGTGG GCGCTACTCC
TCGTACTGGT CGTTCGATGA TTTTCTCAAG CGTCAGCAGC GTGACACGGG CGTGAGTACC
CAGGTTGTCC CAAGCGGTAA AGAGCTCTGG TATACCACGC GTAAACAGCT GTCGCAGGAG
GAGTGGCGCG CAGTTGTGGA TGAAAAACTT CAATTCGCAC AAATGTTCTG GGACATGTTC
GGCTATAGCG AAGCCGAACG GCAGGCTGAT AAGGCATCTA TTGAAGCGAG TACGCCGTAC
GTTCTCGATG TGGACCAGAA AAAACACTGG GCGCATGACG GCAAGGGAAA GTATCAGCGT
AGTAACAACC CGTGCATCGC GGCTGCAGCC GCTGGCGAGG AAATAGTGAC ATGCAGCGCT
GCCCTGTACA GCGGTGCTGC AGATGCTGTC GACAGTGAGG GTAATCTGGT CAATCAGGCA
GTCGATACCT CTGCGCGGCA CCGCAAGGAT CAGGGGTGGG TGCCCAACCT GTCCGCCACA
TTCTACACGT CGGAGAACGG CCGATTTTAC CTTCGTTACA GCGAAGCGAT CCGTTACCCA
AGCATGTTCG AAAGTACCGT TGGTTTCTCG GCTTCGCTGA CGCCATGGGA CTTGAAGCCT
GAACATGCGC ATAACTATGA AGTCGCCTAT ATCCATAACC TGAGTGGTTG GTGGGGCAGT
GAGCAGGCGG ATGTAAAGCT AACGTATTAT CACAACACGA CCAATGACGT CATCGAGCGT
AGCCCGCAGT TGGTGTTCTC CAATATAGAG AAACAAACTA CCGCAGGCGT TGAGTTACAA
GGCCGATACG ATAATGGCGG TTTTTTCACT GACTTGAGCG TGGCGCATGT GCTCAAGAAT
GAAGTGTGCG ATGAAAACTC GGCGATGCAA CTGGACGCCA CCGGCGCTAC CCCGAACTGC
GTGGATGACG GCTTTATCGG TGGTTACCTG GTGGGTATGG CAATGCCTGA ATGGTCCGCC
AACCTTGGGT TGGGCGCACG TTTCCTTGAC CGTCGCCTGG AAGTGGGTGG GCGTGTCATT
TACTACAAGG GACATGACAG CAAGTTTCAC AGTAACTACA GCGGTAATCC CATGGTTAGT
TACTACCTGA ATACGCCATT GTCCTGGGAT GACATTGTGA CCTACGACGC GTATGTCAAC
TACAAGCTCA CCGACGACGT GAGTGTCGAG TTGGTCGGTA CCAACCTGAC CAATCTCTAT
TATTTGGACC CTTTGACCCG GTCGGCCATG CCCGCACCAG GCCGAACACT GAAAATCGGT
TTAACAGCAA ACTTCTGA
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| Protein sequence | MSKGASGRLA PQRGTLSLGI QLALLACCGA TPVLPAMAAT DPAGDARSQA GQYHQFDVKG
GALEDAMLQL ARQAGAELYL TGEAFNGLYA NPVQGRFSLE GALKQLLSGL PISFSLSGGP
DRPVIHLQSA TSAGTDDLHP TYVYGQRDGR SRDEKGYSDI YDQDISTVYA GKEQIERYKG
AAPADVFKGM LNVYSGDARN SGALDPNVRG IQGPGRVPLT IDGTEQALTV YRGYMGANNR
NYIDPNLIGS IKVIKGPNLE RNVYSGVGGA VVVNTLSVDD ILKEGEAFGG EFKIEGSNNS
VSPKLPTLMT GQMPGADYQY IPINSYYDPS LYKHPRTSSS NDLLSSDDKA YRLALGTRQE
HFDLMGAYAY REKGNHYAGK KKSSYYASGE LVDGKWDYVP NLARIYKPGD EVPNSSSKME
SWLAKATWKI DEGQRLEFGY RATDSLYGEI LPSRISFFTP GSTYDAATYG VPQWPLSHVD
SKAYNVEYKL NPEDNRWVDF YSNLWMTRTV SDTYSSGGVP NETTAQNPEF RNTAVANAKH
DRAGLTVSNK LKLLDSLDLT LGGSYQHEKL SSGDSIYDPT TFSATRLFPR AGRREEQEYN
FNFDWQPVSF ARFTAGGRYS SYWSFDDFLK RQQRDTGVST QVVPSGKELW YTTRKQLSQE
EWRAVVDEKL QFAQMFWDMF GYSEAERQAD KASIEASTPY VLDVDQKKHW AHDGKGKYQR
SNNPCIAAAA AGEEIVTCSA ALYSGAADAV DSEGNLVNQA VDTSARHRKD QGWVPNLSAT
FYTSENGRFY LRYSEAIRYP SMFESTVGFS ASLTPWDLKP EHAHNYEVAY IHNLSGWWGS
EQADVKLTYY HNTTNDVIER SPQLVFSNIE KQTTAGVELQ GRYDNGGFFT DLSVAHVLKN
EVCDENSAMQ LDATGATPNC VDDGFIGGYL VGMAMPEWSA NLGLGARFLD RRLEVGGRVI
YYKGHDSKFH SNYSGNPMVS YYLNTPLSWD DIVTYDAYVN YKLTDDVSVE LVGTNLTNLY
YLDPLTRSAM PAPGRTLKIG LTANF
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