| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1519 |
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| Symbol | |
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| ID | 5869295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1705775 |
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| End bp | 1706857 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546633 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001667760 |
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| Protein GI | 167032529 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.676476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC AGATTCTGAT TCTCCCAGGT GACGGTATCG GCCCGGAAAT CATGGCCGAA
GCGGTCAAGG TGCTGGAGCT GGCCAACGAC AAGTTCCAGC TCGGTTTCAG CCTGGCGCAC
GACGTGATCG GCGGTGCCGC CATCGACAAG CACGGCGTGC CACTGGCCGA CGAAACCCTG
GAGCGTGCGC GCCAGGCCGA TGCCGTGCTG CTGGGCGCCG TGGGTGGCCC GAAGTGGGAC
AAGATCGAGC GAGACATTCG CCCGGAGCGC GGCCTGCTGA AAATCCGTTC GCAACTGGGC
CTGTTCGCCA ACCTGCGCCC GGCCATCCTC TACCCGCAAC TGGCCGATGC CTCGTCGCTG
AAGCCGGAAA TCGTTTCGGG CCTGGACATC CTCATCGTTC GTGAGCTGAC CGGTGGTATC
TACTTCGGTG CCCCGCGTGG CCAGCGCGAG CTGGAAGGCG GCGAGCGCCA GGCCTACGAC
ACCCTGCCTT ACAGCGAGAG CGAAGTGCGC CGCATTGCCC GTGTCGGCTT CGACATGGCC
CGCGTGCGCG GCAAGAAGCT GTGCTCGGTG GACAAGGCCA ACGTCCTGGC CTCCAGCCAG
CTGTGGCGTG AAGTGGTCGA AGACGTGGCC AAGGACTACC CGGATGTGGA ACTGAGCCAC
ATGTACGTCG ACAACGCGGC CATGCAGCTC GTTCGTGCCC CCAAACAGTT CGACGTGATG
GTGACCGACA ACATGTTCGG TGACATTCTG TCGGATGAAG CTTCCATGCT GACCGGTTCC
ATCGGCATGC TGCCTTCGGC GTCGTTGGAT GCCGACAACA AGGGCATGTA CGAGCCGTGC
CACGGCTCGG CGCCGGACAT CGCAGGCCTT GGCATCGCCA ACCCGCTGGC GACCATCCTG
TCGGTGTCGA TGATGCTGCG TTACAGCTTC AATCAGTCGG CTGCCGCCGA GGCGATCGAG
AAGGCCGTGA GCCTGGTTCT GGACCAGGGC CTGCGCACCG GCGACATCTT CTCCGAAGGC
TGCCGCAAAG TTGGTACGCA GGAAATGGGC GACGCAGTAG TCGCAGCGCT GCGGAATCTG
TAA
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| Protein sequence | MSKQILILPG DGIGPEIMAE AVKVLELAND KFQLGFSLAH DVIGGAAIDK HGVPLADETL
ERARQADAVL LGAVGGPKWD KIERDIRPER GLLKIRSQLG LFANLRPAIL YPQLADASSL
KPEIVSGLDI LIVRELTGGI YFGAPRGQRE LEGGERQAYD TLPYSESEVR RIARVGFDMA
RVRGKKLCSV DKANVLASSQ LWREVVEDVA KDYPDVELSH MYVDNAAMQL VRAPKQFDVM
VTDNMFGDIL SDEASMLTGS IGMLPSASLD ADNKGMYEPC HGSAPDIAGL GIANPLATIL
SVSMMLRYSF NQSAAAEAIE KAVSLVLDQG LRTGDIFSEG CRKVGTQEMG DAVVAALRNL
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