| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1517 |
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| Symbol | leuD |
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| ID | 5869293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1704221 |
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| End bp | 1704865 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546631 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001667758 |
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| Protein GI | 167032527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0857683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCCT TTACCCAGCA CACTGGCCTC GTCGCGCCGT TGGACCGTGC CAACGTCGAC
ACCGACCAGA TCATCCCCAA GCAGTTCTTG AAGTCGATCA AGCGCACCGG CTTTGGCCCG
AACCTGTTCG ACGAGTGGCG TTACCTGGAC GTGGGCCAGC CCTACCAGGA CAACAGCAAG
CGCCCGGTCA ACCAGGAGTT TGTGCTCAAC CACGCGCGCT ACCAGGGTGC CAGCGTGTTG
CTGGCGCGGG AGAACTTCGG TTGCGGCTCC AGCCGCGAGC ACGCCCCGTG GGCGCTGGAC
GAATATGGCT TCCGTAGCAT CATCGCGCCG AGCTTTGCCG ATATCTTCTT CAACAACAGC
TTCAAGAACG GCTTGCTGCC GATCATCCTC AGCGATGAGG AAGTCGACGA GCTGTTCAAG
CAGGTCGAAG CCAACCCGGG CTACCAACTG ACCATCGACT TGCAGGCCCA GGCGGTGACT
CGCCCGGATG GCAAGGTACT GCACTTCGAG ATCGACGCGT TCCGCAAGCA CTGCCTGCTC
AACGGCCTGG ACGATATCGG CCTGACCTTG CAGGACAGCG ATGCGATCAA GGCCTTCGAA
GGCAAGCACC GCGCCGGGCA GCCTTGGCTG TTCCGTGATG CCTGA
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| Protein sequence | MKAFTQHTGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD VGQPYQDNSK
RPVNQEFVLN HARYQGASVL LARENFGCGS SREHAPWALD EYGFRSIIAP SFADIFFNNS
FKNGLLPIIL SDEEVDELFK QVEANPGYQL TIDLQAQAVT RPDGKVLHFE IDAFRKHCLL
NGLDDIGLTL QDSDAIKAFE GKHRAGQPWL FRDA
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