| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1516 |
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| Symbol | |
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| ID | 5869292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1702791 |
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| End bp | 1704224 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546630 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001667757 |
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| Protein GI | 167032526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.11161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA AAACGCTCTA CGACAAACTC TGGGAAGCCC ATGAGGTCAA GCGCCGTGAT
GACGGCTCGT CCTTGATCTA CATCGACCGC CACATCATCC ACGAAGTGAC GTCGCCCCAG
GCCTTCGAAG GCCTGCGCCT GGCCAACCGC AAACCGTGGC GCATCGACAC CAACATCGCC
ACGCCCGACC ATAACGTGCC GACCACGCCA GAGCGCAAGG GCGGTATCGA GGCCATCGTC
GACCAGGTGT CGCGCCTGCA GGTGCAGACC CTCGACGAGA ACTGTGACGA ATACGGCATC
GTCGAATTCA AGATGAATGA CGAGCGCCAA GGTATTGTCC ATGTCATCAG CCCGGAGCAG
GGTGCCACCT TGCCGGGCAT GACCGTGGTC TGCGGTGACT CGCACACTTC CACCCACGGC
GCCTTCGGTG CCTTGGCCCA TGGCATCGGC ACCTCCGAGG TCGAGCACGT GCTCGCCACC
CAGTGCCTGG TCGCCAAGAA GATGAAGAAC ATGCTGGTGC GCGTGGAAGG CCAATTGCCA
GCCGGCGTTA CCGCCAAGGA CATCGTGCTG GCCGTGATCG GCAAGATCGG CACGGCCGGT
GGCAACGGCC ACGCCATGGA GTTCGCTGGC AGCGCCATCC GCGAACTGTC GATGGAAGGC
CGCATGACCA TCTGCAACAT GTCCATCGAA GCCGGTGCCC GTGTGGGCCT GGTGGCGACC
GACGCCACTA CCGTTGCCTA CGTCGAAGGC CGCCCGTACG CGCCGAAAGG CGAGCAATGG
AAGCAAGCGG TCGAATCGTG GAAAGACCTG GTGTCGGATG AAGACGCCGT GTTCGACACC
GTGGTCGAGC TGGATGCCAG CCAGATCAAG CCACAGGTCA GCTGGGGCAC TTCGCCCGAG
ATGGTCCTGG CCGTCGACCA GCGCGTACCG GACCCGGCTG CCGAAGCCGA CCTGGTCAAG
CGTGGTTCGA TCGAGCGTGC GTTGAAGTAC ATGGGCCTGA CCGCCAACCA GGCGATCACC
GATATCAAAC TGGACCGCGT GTTCATCGGC TCGTGCACCA ATTCGCGTAT CGAAGACCTG
CGCGCCGCGG CGGAAATCGC CAAGGGCCGC AAGGTGGCCG CCAGCGTCAA GCAAGCCATC
GTCGTACCGG GCTCGGGCCT GGTCAAAGCC CAGGCCGAGC GTGAAGGCCT GGACAAGATC
TTCCTCGAAG CCGGTTTCGA ATGGCGTGAA CCAGGCTGCT CGATGTGCCT GGCGATGAAC
CCGGACCGCC TGGAGAGCGG CGAGCATTGC GCGTCCACCT CCAACCGCAA CTTCGAAGGC
CGCCAGGGCG CCGGTGGTCG TACCCACCTG GTCAGCCCGG CCATGGCCGC CGCTGCTGCG
GTAGCCGGCC ATTTCATCGA TGTCCGCGAG TTGATCCAAG GGAGCGCAGC ATGA
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| Protein sequence | MAGKTLYDKL WEAHEVKRRD DGSSLIYIDR HIIHEVTSPQ AFEGLRLANR KPWRIDTNIA
TPDHNVPTTP ERKGGIEAIV DQVSRLQVQT LDENCDEYGI VEFKMNDERQ GIVHVISPEQ
GATLPGMTVV CGDSHTSTHG AFGALAHGIG TSEVEHVLAT QCLVAKKMKN MLVRVEGQLP
AGVTAKDIVL AVIGKIGTAG GNGHAMEFAG SAIRELSMEG RMTICNMSIE AGARVGLVAT
DATTVAYVEG RPYAPKGEQW KQAVESWKDL VSDEDAVFDT VVELDASQIK PQVSWGTSPE
MVLAVDQRVP DPAAEADLVK RGSIERALKY MGLTANQAIT DIKLDRVFIG SCTNSRIEDL
RAAAEIAKGR KVAASVKQAI VVPGSGLVKA QAEREGLDKI FLEAGFEWRE PGCSMCLAMN
PDRLESGEHC ASTSNRNFEG RQGAGGRTHL VSPAMAAAAA VAGHFIDVRE LIQGSAA
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