| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1512 |
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| Symbol | |
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| ID | 5869288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1696777 |
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| End bp | 1697748 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546626 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001667753 |
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| Protein GI | 167032522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0251677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTG CCCTGGCCCC CATGGAGGGG CTGGTCGACA ACATCCTGCG CGACGTGCTG
ACGCGCGTGG GCGGTATCGA CTGGTGCGTC ACCGAGTTCA TTCGCGTGTG CGACCGCCTG
CTGCCGCCTT CTTCGTTCGA CAAGCTGGCG CCCGAATTAC GCCAGGGCGC GCGCACGGCT
GCCGGGGTGC CCATGCGCGT GCAGTTGCTG GGTTCGGACC CGGTGTGCCT GGCGGAGAAC
GCCGCGCTGG CTTGTGAATT GGGGGCGCCG GTGATCGACC TGAACTTCGG TTGCCCGGCC
AAGACCGTGA ACAAGTCACG CGGTGGTGCC GTGCTGCTCA AGGAGCCGGA GTTGCTGCAT
GCCATCGTGC GTGAAGTACG CCATGCGGTT CCGGCGAATA TCCCGGTCAC GTCGAAGATG
CGGCTGGGCT TCGACAGCCC TGATGGGGCG CTGGAGTGCG CCACGGCGCT GGCCGAAGGC
GGTTCTGCGC ACCTGGTGGT GCACGCACGG ACCAAGGTCG AGGGCTACAA GCCACCCGCG
CATTGGGAGT GGGTGGCGCG GGTACAGGAT GTGGTCAAGG TGCCGGTGTT CGCCAATGGC
GAGATCTGGA CCGTCGACGA CTGGCGGCGT TGCCGTGAAG TCAGTGGGGC CGAAGATATC
ATGCTGGGCC GTGGGCTGGT GTCGCGCCCA GACCTGGGCC TGCAGATAGC CGCCGCGCGT
GAGGGGCGCG ACTATCAGCC GATGAGCTGG GATGACCTGC TGCCGTTGTT GCGCGAGTTC
TGGCGCCAGG CCCAGAACAA GTTGTCGCCG CGCTATGCGC CAGGGCGGAT GAAGCAGTGG
CTGGCGATGT TGACCCGCAG TTACCCCGAA GCGGTGGTGT TGTTTGCCGA GTTGCGTCGG
GAGGATGATT GCGCGCGGAT CAGCCGTTTG CTTGGGGTTG AGCCTCAAGC TCTGGAAGCA
TGTGTTGCCT GA
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| Protein sequence | MQIALAPMEG LVDNILRDVL TRVGGIDWCV TEFIRVCDRL LPPSSFDKLA PELRQGARTA
AGVPMRVQLL GSDPVCLAEN AALACELGAP VIDLNFGCPA KTVNKSRGGA VLLKEPELLH
AIVREVRHAV PANIPVTSKM RLGFDSPDGA LECATALAEG GSAHLVVHAR TKVEGYKPPA
HWEWVARVQD VVKVPVFANG EIWTVDDWRR CREVSGAEDI MLGRGLVSRP DLGLQIAAAR
EGRDYQPMSW DDLLPLLREF WRQAQNKLSP RYAPGRMKQW LAMLTRSYPE AVVLFAELRR
EDDCARISRL LGVEPQALEA CVA
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