| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1511 |
|---|
| Symbol | |
|---|
| ID | 5869287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1696291 |
|---|
| End bp | 1696725 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546625 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001667752 |
|---|
| Protein GI | 167032521 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0245282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGG ACCTGGCAAC ACCCTTCGTC ATCGACCTGC GCGTCGGCAG CGAGGATATC
GACGGCCTCG GCCACGCCAA CAATGCAGTC TATGTCACCT GGCTGGAGCG CTGCGCGTGG
CGCCACTCCC AGCGCCTGGG TCTGGACCTG GCCGAGTATC GGCGCCTGGA CCGGGCGATG
GCCGTGGTGC GTCACGAAAT TGATTATCTG GCTGCCGCCT ACGAGGACGA CGAGCTGCAA
CTGGCCACCT GGATCATCGA TTGGGACCAG CGGCTGCGCA TGACCCGGCG CTTCCAGCTC
AAGCGCCCAC GTGACGGTGT AACCCTGCTG CGCGCGCAAA CCACCTTTGC CTGCATCGAG
TTGTCCAGCG GTAAACCCAA GCGTATGCCG GCGGAATTCA TCGAGGGTTA CGGTCCGGCG
CTGATCGGCG CCTGA
|
|---|
| Protein sequence | MSWDLATPFV IDLRVGSEDI DGLGHANNAV YVTWLERCAW RHSQRLGLDL AEYRRLDRAM
AVVRHEIDYL AAAYEDDELQ LATWIIDWDQ RLRMTRRFQL KRPRDGVTLL RAQTTFACIE
LSSGKPKRMP AEFIEGYGPA LIGA
|
|---|
| |