| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1507 |
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| Symbol | |
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| ID | 5869277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1690932 |
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| End bp | 1691987 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546615 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001667748 |
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| Protein GI | 167032517 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.194742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC AACTCAAACG CCGCCTGGCG ATCTTCTTTA CTCTGGTGGC CATCATCGCC
CTCGCCTTCC TGGCCCACTG GTACTTCAAG GGCCGCTTCT ACGAGAGCAC CGACAATGCC
TATGTGCAGG GCGAGATCAC CCGTATCTCC AGCCAGCTTG GCGCACGTAT CGACACTGTG
CCGGTCGAGG ACAACCAGCA CGTCAACAAG GGCGACCTGC TGGTGCGCCT GGAAGCCGCC
GACTTCGAAC TGGCTGTCGA GCGCGCACAC GCCGCCTTGG CCACCCGCGA AGCCGAGTAC
GCGCAGGCAC AGAGCCGCCT GACCCAACAA GGTAGCCTGA TTGCCGCTGG CCAGGCTCAG
GTGGCGGCCA ACCAGGCCAC GTTCGACCGC TCACGCCTGG ACCTGAGCCG CGCCGAGAAG
TTGCGCAAGC CGGGTTATGT CTCCGAAGAG CGGGTCACCA CCCTGTCGGC GGACAGCCAT
GTTGCCGGCT CCCAGGTCGA CAAGGCCCGG GCCGACTTGC AGAGCCAGCG CCAGCAGGTC
AACGCCCTGA ACGCCGACCT GAAACGCCTG GATGCGCAAA TTGCCAACGC CCGCGCCGAC
CTGGCCCAGG CCGAGCTGAA CCTGACCCGC TGCGAAATCC GCGCGCCCAT CAGCGGTACC
ATCGGCCAGC GCAATGCGCG CAATGGCCAG GTGGTACAGG CCGGCGCTTA CCTGCTGTCG
ATCGTGCCGG ACGAAGATAT CTGGGTGCAG GCCAACTTCA AGGAAACCCA GATTGGCCAC
ATGCAGCCTG GCCAGCGTGC CGAGCTGTTG TTCGACAGCT ACCCCGACAC CCCCATCGAA
GGGCGGGTGG ACAGCCTGTT CGCCGCCTCG GGCGCGCAGT TCAGCCTGCT GCCGCCAGAC
AACGCCACCG GCAACTTCAC CAAGGTGGTG CAGCGTATCC CGGTAAAACT CACCTTCAGC
GCCGACAACC CGTTGCACGG GCGTATCCGC CCTGGCATGT CGGTCACCGC CACCGTCGAC
TTGCGCCGCG AAGACGAAGG CCAACATGGC CGGTGA
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| Protein sequence | MPAQLKRRLA IFFTLVAIIA LAFLAHWYFK GRFYESTDNA YVQGEITRIS SQLGARIDTV
PVEDNQHVNK GDLLVRLEAA DFELAVERAH AALATREAEY AQAQSRLTQQ GSLIAAGQAQ
VAANQATFDR SRLDLSRAEK LRKPGYVSEE RVTTLSADSH VAGSQVDKAR ADLQSQRQQV
NALNADLKRL DAQIANARAD LAQAELNLTR CEIRAPISGT IGQRNARNGQ VVQAGAYLLS
IVPDEDIWVQ ANFKETQIGH MQPGQRAELL FDSYPDTPIE GRVDSLFAAS GAQFSLLPPD
NATGNFTKVV QRIPVKLTFS ADNPLHGRIR PGMSVTATVD LRREDEGQHG R
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