Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1503 |
Symbol | |
ID | 5869272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1685223 |
End bp | 1685624 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546610 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001667744 |
Protein GI | 167032513 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCT CAACGCTCAT CCTTTTCGCT CTGCTCGCCG CCCAAACCCC CGCCTGGGCC CACGGCGACG TTGCCGACCA GGTCACAGTC CTGCAGCAGC AACAACCCTC GAATGCCCCC GGCAAAACCG CCGTCATGCT TACCGTCAGC TACGCACCCG GCGAAGCGTC CCCTGCGCAT CAGCACCCAG GTGCAGTGAT GGCCTACGTG CTGGAAGGTG CGGTGGTATC GAAGCTCAAT AACGAGCAGG AAAAGACCTA CAAGGCCGGC CAGTACTGGT ACGAGGCGCC CGGCACCGTG CATAGCGTGT CACGTAATGC CAGCAAGACC CAGCCTGCCA AGCTGCTGGT CTGGAGCCTG GTGGATGAGG GCAAGCCGGT GACCGAAGCG CTGGGCCAAT AA
|
Protein sequence | MKPSTLILFA LLAAQTPAWA HGDVADQVTV LQQQQPSNAP GKTAVMLTVS YAPGEASPAH QHPGAVMAYV LEGAVVSKLN NEQEKTYKAG QYWYEAPGTV HSVSRNASKT QPAKLLVWSL VDEGKPVTEA LGQ
|
| |