Gene PputGB1_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1495 
Symboltmk 
ID5869264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand+ 
Start bp1678552 
End bp1679184 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID641546602 
Productthymidylate kinase 
Protein accessionYP_001667736 
Protein GI167032505 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.845785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCT TGTTTATTAC TTTGGAAGGC CCCGAAGGCG CGGGCAAGAG CACCAATCGC 
GACTACCTGG CCGCGCGCCT GCGCGAGCAC GGCCTGGACG TGGTGCTGAC CCGTGAGCCT 
GGTGGTACAC CGTTGGCGGA AAGGGTGCGC GAACTGCTGC TGGCGCCCAG TGATGAAAGC 
ATGGCGGCCG ACACTGAACT GCTGCTGGTG TTCGCCGCGC GCGCCCAGCA CTTGGCGCAG 
GTGATCCGTC CGGCATTGGC CCGTGGGGCC GTGGTGCTGT GTGATCGTTT CACCGATGCC 
ACCTATGCCT ATCAGGGCGG TGGCCGTGGT TTGTCGGTCG AGCGTATCGC AACCCTGGAG 
CAGTTCGTCC AGGGCGGCCT GCGCCCGGAC CTGACCTTGG TCTTCGACCT GCCGGTGGAG 
GTGGGCCTGG CCCGCGCCGC AGCCCGTGGC CGCCTGGACC GTTTCGAGCA GGAGGGCCAG 
GCCTTCTTCG AAGCCGTGCG CCAGGCGTAC CTGCAGCGCG CCCAGCGTGC GCCGCAGCGC 
TACAGCTTGC TTGATGCCGC ACAATCCCTG GAGGCCGTGC AGCGTGACAT CGACGCTCTG 
CTGCCAGGCA TTGTGGAGCG TTGCCGTGGC TGA
 
Protein sequence
MSGLFITLEG PEGAGKSTNR DYLAARLREH GLDVVLTREP GGTPLAERVR ELLLAPSDES 
MAADTELLLV FAARAQHLAQ VIRPALARGA VVLCDRFTDA TYAYQGGGRG LSVERIATLE 
QFVQGGLRPD LTLVFDLPVE VGLARAAARG RLDRFEQEGQ AFFEAVRQAY LQRAQRAPQR 
YSLLDAAQSL EAVQRDIDAL LPGIVERCRG