Gene PputGB1_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1490 
SymbolfabG 
ID5869259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1673906 
End bp1674646 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID641546597 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001667731 
Protein GI167032500 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.179868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC AAGGTAAAGT TGCACTGGTC ACCGGCGCCA GCCGTGGCAT TGGCCAGGCC 
ATCGCCCTCG AGCTGGGCCG CCAGGGCGCG ACCGTGATCG GCACCGCCAC TTCGGCGTCC
GGTGCCGAGC GCATCGCTGC CACCCTGAAA GAGCACGGTA TCGCCGGTAC CGGCATGGAA
CTGAACGTGA CCAGCGCCGA GTCCGTCGAA GCTGTGCTGG GCGCCATCGC CGAGCAGTTC
GGCGCACCGG CAATCCTGGT CAACAACGCC GGCATCACTC GCGACAACCT CATGCTGCGC
ATGAAGGACG ATGAGTGGTT CGACGTGATC GACACCAACC TGAACAGCCT CTACCGTCTG
TCCAAGGGCG TGCTGCGCGG CATGACCAAG GCACGCTGGG GCCGTATCAT CAGCATCGGC
TCGGTCGTCG GTGCCATGGG CAACGCTGGC CAGGCCAACT ACGCGGCCGC CAAGGCTGGC
CTGGAAGGCT TCAGCCGTGC CCTGGCGCGT GAAGTGGGTT CGCGCGGCAT CACCGTCAAT
TCGGTGACCC CGGGCTTCAT CGACACCGAC ATGACCCGCG AACTGCCAGA AGCGCAGCGC
GAAGCCCTGC AGACCCAGAT TCCGCTGGGC CGCCTGGGCC AGGCCGACGA AATCGCCAAG
GTGGTTTCGT TCCTGGCGTC CGACGGTGCA GCCTACGTGA CTGGCGCTAC CGTGCCGGTC
AACGGCGGGA TGTACATGTA A
 
Protein sequence
MSLQGKVALV TGASRGIGQA IALELGRQGA TVIGTATSAS GAERIAATLK EHGIAGTGME 
LNVTSAESVE AVLGAIAEQF GAPAILVNNA GITRDNLMLR MKDDEWFDVI DTNLNSLYRL
SKGVLRGMTK ARWGRIISIG SVVGAMGNAG QANYAAAKAG LEGFSRALAR EVGSRGITVN
SVTPGFIDTD MTRELPEAQR EALQTQIPLG RLGQADEIAK VVSFLASDGA AYVTGATVPV
NGGMYM