| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1490 |
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| Symbol | fabG |
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| ID | 5869259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1673906 |
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| End bp | 1674646 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546597 |
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| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001667731 |
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| Protein GI | 167032500 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.179868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTGC AAGGTAAAGT TGCACTGGTC ACCGGCGCCA GCCGTGGCAT TGGCCAGGCC
ATCGCCCTCG AGCTGGGCCG CCAGGGCGCG ACCGTGATCG GCACCGCCAC TTCGGCGTCC
GGTGCCGAGC GCATCGCTGC CACCCTGAAA GAGCACGGTA TCGCCGGTAC CGGCATGGAA
CTGAACGTGA CCAGCGCCGA GTCCGTCGAA GCTGTGCTGG GCGCCATCGC CGAGCAGTTC
GGCGCACCGG CAATCCTGGT CAACAACGCC GGCATCACTC GCGACAACCT CATGCTGCGC
ATGAAGGACG ATGAGTGGTT CGACGTGATC GACACCAACC TGAACAGCCT CTACCGTCTG
TCCAAGGGCG TGCTGCGCGG CATGACCAAG GCACGCTGGG GCCGTATCAT CAGCATCGGC
TCGGTCGTCG GTGCCATGGG CAACGCTGGC CAGGCCAACT ACGCGGCCGC CAAGGCTGGC
CTGGAAGGCT TCAGCCGTGC CCTGGCGCGT GAAGTGGGTT CGCGCGGCAT CACCGTCAAT
TCGGTGACCC CGGGCTTCAT CGACACCGAC ATGACCCGCG AACTGCCAGA AGCGCAGCGC
GAAGCCCTGC AGACCCAGAT TCCGCTGGGC CGCCTGGGCC AGGCCGACGA AATCGCCAAG
GTGGTTTCGT TCCTGGCGTC CGACGGTGCA GCCTACGTGA CTGGCGCTAC CGTGCCGGTC
AACGGCGGGA TGTACATGTA A
|
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| Protein sequence | MSLQGKVALV TGASRGIGQA IALELGRQGA TVIGTATSAS GAERIAATLK EHGIAGTGME
LNVTSAESVE AVLGAIAEQF GAPAILVNNA GITRDNLMLR MKDDEWFDVI DTNLNSLYRL
SKGVLRGMTK ARWGRIISIG SVVGAMGNAG QANYAAAKAG LEGFSRALAR EVGSRGITVN
SVTPGFIDTD MTRELPEAQR EALQTQIPLG RLGQADEIAK VVSFLASDGA AYVTGATVPV
NGGMYM
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