| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1482 |
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| Symbol | |
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| ID | 5869251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1667692 |
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| End bp | 1668693 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546589 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001667723 |
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| Protein GI | 167032492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00286389 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGT GCTTCAATTC CATAAAAAAT TGTTATGATC CCGCCATGAC GACCAATACC
CCTCCGACTT CCGGCGTTCA GCTGATCGAA GTCGCGCCGG AGCTTGCCGG CCAACGCATC
GACAATTTCC TCATCACGGC CCTCAAGGGC GTGCCCAAGA CGCTGGTCTA CCGCATCCTG
CGCAAGGGTG AGGTGAGGGT CAACAAGGGC CGCGTCAAGC CGGAGTACAA AATCCAGGCC
GGCGACATCG TGCGGGTGCC GCCCGTCCGC CTGCCGGAAC GTGACGAACC GGCACCGGTG
GCCCAGGGCC TGTTGCAGCG CCTGGAGGCC GCGATCGTCT ACGAAGACAA GGCGCTGATC
GTGATGAACA AGCCCGCCGG CATTGCCGTG CACGGCGGCA GCGGCCTGAG CTTCGGGGTG
ATCGAGGCGC TGCGCCAACT GCGCCCGGAT GCCAAGGAGC TGGAACTGGT GCACCGCCTG
GATCGCGACA CCTCCGGCCT GCTGATGATC GCCAAGAAGC GCAGCATGCT GCGCCACCTG
CATGCCGCCC TGCGCGGCGA TGGTGTCGAC AAGCGCTACA TGGCGCTGGT GCGTGGCCAT
TGGCCGACCT CGAAAAAACA GGTCAATGCG CCATTGCTCA AGAGCAACCT GCGTTCCGGT
GAGCGCATGG TCGAGGTGAG CGACGAGGGC AAGGAGGCGC TGACCCTGTT CCGCGTGCTG
CGCCGTTTTG GCGAATTCGC CACCATTGTC GAGGCGCGCC CGATCACCGG TCGTACCCAT
CAGATCCGTG TGCACACCCT GCACGCCGGG CACATGATTG CCGGCGACAG CAAATACGGT
GACGAAGACT TCAGTCGCGA GATTCGCGAG CTGGGCGGCA AGCGCCTGTT CTTGCATGCC
TATGCGCTGA CCGTGCCGCT GCCGGACGGA GGCGAGCTTA AACTCGAGGC GCCGGTGGAT
GAGGTGTGGG CGAAAACCAT TGAGCGTTTG AGTGCATCCT GA
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| Protein sequence | MIKCFNSIKN CYDPAMTTNT PPTSGVQLIE VAPELAGQRI DNFLITALKG VPKTLVYRIL
RKGEVRVNKG RVKPEYKIQA GDIVRVPPVR LPERDEPAPV AQGLLQRLEA AIVYEDKALI
VMNKPAGIAV HGGSGLSFGV IEALRQLRPD AKELELVHRL DRDTSGLLMI AKKRSMLRHL
HAALRGDGVD KRYMALVRGH WPTSKKQVNA PLLKSNLRSG ERMVEVSDEG KEALTLFRVL
RRFGEFATIV EARPITGRTH QIRVHTLHAG HMIAGDSKYG DEDFSREIRE LGGKRLFLHA
YALTVPLPDG GELKLEAPVD EVWAKTIERL SAS
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