| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1478 |
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| Symbol | |
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| ID | 5869247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1661330 |
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| End bp | 1662094 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546585 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001667719 |
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| Protein GI | 167032488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.31787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA ACTTCACCGT GGTGATCCCC GCCCGGCTGC GCTCCACGCG TTTGCCGGGC
AAACCGTTGT TGCCGATCGC CGGCAAGCCG ATGGTGCAGC ATGTGTGGGA GCAGGCGCGC
AGGAGCGGTG CCAGCCGCGT GGTCATCGCC ACCGACGACG CCAGCATCCT CGAAGCTTGC
CAGGCCTTTG GCGCCGAAGT GCTGATGACC CGTGCCGACC ATGAATCCGG CACCGACCGC
CTGGCTGAAG TGGTCGCGCA CCTCGGCCTG CCGGCTGATG CCATCGTGGT CAACGTGCAA
GGCGACGAGC CGCTGATCCC ACCGGTGATC ATCGACCAGG TGGCCGCCAA CCTGGCAGCC
CACCCGGAGG CTGGCATCGC CACCCTGGCC GAGCCGATTC ATGAGCCGGA AACCGTGTTC
AATCCCAATG CGGTCAAGGT GGTGAGCGAC AAGAACGGCC TGGCCCTGAC CTTCAGCCGT
GCGCCGCTGC CCTGGGCTCG CGATGCCTTT GCCAAGGACC GCAACGTGTT GCCGGAGGGC
GTGCCGTATC GCCGTCACAT CGGCATGTAC GCCTACCGCG TCGGCTTCCT GCAGGACTTC
GTCAGCTGGG GTCCGTGCTG GCTTGAGCAA ACCGAAGCGC TGGAGCAGCT GCGCGCCCTG
TGGCACGGCG TGCGCATTCA CGTCGAGGAC GCCATCGAGG CGCCTGCCGT GGGCGTGGAT
ACCCCTGAAG ACCTGGAGCG CGTAAGGCGC TTGCTGGAGG CCTGA
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| Protein sequence | MSLNFTVVIP ARLRSTRLPG KPLLPIAGKP MVQHVWEQAR RSGASRVVIA TDDASILEAC
QAFGAEVLMT RADHESGTDR LAEVVAHLGL PADAIVVNVQ GDEPLIPPVI IDQVAANLAA
HPEAGIATLA EPIHEPETVF NPNAVKVVSD KNGLALTFSR APLPWARDAF AKDRNVLPEG
VPYRRHIGMY AYRVGFLQDF VSWGPCWLEQ TEALEQLRAL WHGVRIHVED AIEAPAVGVD
TPEDLERVRR LLEA
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