| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1476 |
|---|
| Symbol | lpxK |
|---|
| ID | 5869245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1660102 |
|---|
| End bp | 1661103 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641546583 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_001667717 |
|---|
| Protein GI | 167032486 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.114547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCG CCGACCGTTT GCTCGCCGCC TGGTACGCCG GGCACCCGGC TTTGGCGCTG
CTGCGACCGC TGGAGGCTTT GTATCGCCGT GTGGTCACGC GCAAACGGGC ACGTTTTCTC
AGTGGCGAAA GCGCCAGCTA TCGGGCGCCA GTGCCGGTGA TCGTGGTGGG CAACATCACC
GTGGGCGGCA CCGGCAAGAC GCCGATGATC CTCTGGCTGA TCGAACACTG CCGCCAGCTG
GGGCTGAAGG TGGGCGTGGT CAGCCGTGGC TATGGGGCCA AGCCGCCGCA GTTACCTTGG
CGCGTGCAGG CCAATCAGTG CGCCGACCAG GCGGGCGACG AGCCGCTGCT GATCGTGCAG
CGCACCGGCG TGCCGCTGAT GATCGACCCC GACCGTTCCC GCGCCGTGCA GGCGTTGCTG
GCCAGCGAAC CGCTCGACCT GATCCTGTGC GACGACGGCA TGCAGCATTA CCGCCTGGCC
CGTGACCTGG AACTGGTGCT GATCGATGCC GCCCGTGGCC TGGGCAATGG CCGCTGCCTG
CCGGCCGGCC CTTTGCGCGA GCCCGCCGAA CGCCTGCTGG ATGCAGATGC CGTGCTGTTC
AATGGTGCCA ATGCTGACCG CGCCGATGGC TTTGGCTTCT GCCTGCAGCC GTCCGCGCTG
GTTAACCTGC GCAGCGGCGA GCGCCGTGCG CTCGACCATT TCCCCGCAGG CCAGCGCTTG
CATGCGGTGG CCGGTATCGG TAACCCGCAA CGTTTCTTCA ATACCCTGCT GGGGCTAAAC
TGGCAGCCGG TGCCGCACCC CTTCGCCGAC CATGCGCAAT TCAGCGCCCA GAGCCTGGCC
TTCAGCCCGC AGTTACCGCT GGTGATGACC GAGAAGGACG CGGTGAAATG CCGGGCCTTT
GCCGCTGACG ACTGGTGGTA CCTGGCCGTC GAGGCACAGC CCACGCCGGC TTTCAGCGCC
TGGTTCGACA ACCAGCTACA GCGTTTGCTG CGCAAGCCCT GA
|
|---|
| Protein sequence | MAFADRLLAA WYAGHPALAL LRPLEALYRR VVTRKRARFL SGESASYRAP VPVIVVGNIT
VGGTGKTPMI LWLIEHCRQL GLKVGVVSRG YGAKPPQLPW RVQANQCADQ AGDEPLLIVQ
RTGVPLMIDP DRSRAVQALL ASEPLDLILC DDGMQHYRLA RDLELVLIDA ARGLGNGRCL
PAGPLREPAE RLLDADAVLF NGANADRADG FGFCLQPSAL VNLRSGERRA LDHFPAGQRL
HAVAGIGNPQ RFFNTLLGLN WQPVPHPFAD HAQFSAQSLA FSPQLPLVMT EKDAVKCRAF
AADDWWYLAV EAQPTPAFSA WFDNQLQRLL RKP
|
|---|
| |