| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1470 |
|---|
| Symbol | |
|---|
| ID | 5869239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1654378 |
|---|
| End bp | 1655310 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641546577 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001667711 |
|---|
| Protein GI | 167032480 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCG CCCTGTCCAT CCGACAGCTG ACCAAGACCT ACGGCAATGG CTTTCAGGCC
CTCAAAGGCA TCGACCTCGA TGTTGCCGAA GGCGACTTCT TCGCCTTGCT CGGCCCCAAC
GGCGCCGGCA AGTCCACCAC CATCGGCATT CTCTCCACCC TGGTGAACAA GACCAGTGGC
ACGGTGAACG TGTTTGGCCA CGACCTGGAC CGCGAGCCCT CGGCGCTCAA GCGTTGCCTG
GGCGTGGTGC CGCAAGAGTT CAACTTCAAC CAGTTCGAAA AAACCTTCGA CATCGTCGTG
ACCCAGGCCG GCTACTACGG CATCCCGCCC AAGCTGGCCA AGGAACGCGC CGAACAGTAC
CTGACCCAAT TGGGCCTGTG GGACAAGCGT GATGTGCAGT CGCGTTCGCT GTCCGGCGGC
ATGAAGCGCC GCCTGATGAT TGCCCGCGCG CTGATCCACG AGCCGCGCCT GCTGATCCTT
GACGAGCCCA CCGCGGGTGT GGACATCGAG TTGCGTCGCT CGATGTGGAG CTTCCTCACC
GAGCTGAACC AGAAGGGCAT CACCATCATC CTCACCACCC ATTACCTGGA AGAGGCTGAG
CAGCTGTGCC GTAACATCGG CATCATCGAC CACGGCACCA TCGTCGAGAA CACCAGCATG
CGCCAGTTGC TGGGCAAGCT GCATGTGGAA ACCTTCGTGC TCGACCTCAA GCAGGACCTG
GCCAGTGCAC CTGTGCTGCA AGGCTACCCG AGCCGGCTGC TGACCCCGCA TACCCTGGAG
GTGCAGGTGG ACAAGGACAT CGGCATCACC GCGCTGTTCG GCCAGCTGGC GCTGCAGAAC
ATCGAGGTGC AGAGCCTGCG CAACAAGACC AACCGACTTG AGGAGCTGTT CGTGTCCCTG
GTGGAAAAAA ACTTGTCGAA GGTGGCCGTA TGA
|
|---|
| Protein sequence | MSSALSIRQL TKTYGNGFQA LKGIDLDVAE GDFFALLGPN GAGKSTTIGI LSTLVNKTSG
TVNVFGHDLD REPSALKRCL GVVPQEFNFN QFEKTFDIVV TQAGYYGIPP KLAKERAEQY
LTQLGLWDKR DVQSRSLSGG MKRRLMIARA LIHEPRLLIL DEPTAGVDIE LRRSMWSFLT
ELNQKGITII LTTHYLEEAE QLCRNIGIID HGTIVENTSM RQLLGKLHVE TFVLDLKQDL
ASAPVLQGYP SRLLTPHTLE VQVDKDIGIT ALFGQLALQN IEVQSLRNKT NRLEELFVSL
VEKNLSKVAV
|
|---|
| |