| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1463 |
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| Symbol | |
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| ID | 5869232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1645268 |
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| End bp | 1647469 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546570 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001667704 |
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| Protein GI | 167032473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.458818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.71316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA GGCGCAACTT CACCCTGTCC CCCTTGGCGT CAGCCATTGG GCAACTCTTG
CTAGGCGCCT CTGCTGTGCT CTTCACTGGG CCTGCAGGTG CCCTGACGCT GGTGGACGAT
GAGCAACAAA TCGGTGCCAG TACCCCGGTT GACAGCTACA GGGTCAATGA CGGCGGGCGC
TTGGTAGCCG AGGGGGCTAC CACTCAGCAG ATCGACGTGC GCACAGGCGG AGGTCTACAG
CTTGAGGGCT CCACGGTATC CGCCACGGGT GTCGCTGCAG TCATGGTCAA TGGCGGTGCT
TCGGCAACCA TCGCCAATGG CTCGCGCCTG ACCAGCAACC TGTTTGGCCT CGATGTACTG
CGCAGTGCGA CGGCGGGTTC AACGGTGTCG GTAACGGGCA GCCATATCGA AGGCGGGGTC
GGCGGTGCCA GGGTGGCCGG GAGTTCTCAT CTTTCCCTGA CCGACAGCAC CCTGGTGAGT
ACCGGGGCAG CCGGTGCTGC TTTGCTATTT GGCGATGCTC GGCTGGATGC GACCAACAGC
CAGCTGACCA GTGCCACGGA TGGCATCCGG GTGGTGGGCG ATGCGCTTTC GACTGAAGCT
GCATCGCTCA ATCTGCAGGG CTCGCGGGTG GAGGGCCAGA ATGGCGCTGC CATCCGGGTG
GGTAGCGCAA ACCAGGCGCC CGGCGATGCG GCGATCACCA TCAGCGGCGG TACTACGCTG
GTTGGCAGCA ATGGCAACCT GCTGGAAGTG GCGAACGGCT CCAACGCTAC GATGCTGGTG
GAGGGTAGCA ACCTGGTAGG TGATGTCCTG GTGGAGGACG GTTCCAGCGC CAAGCTGACC
TTGGGCAACC AGGCCAGCCT GACCGGGCGC CTGACCAATG TCGAGAGCTT GGCACTGAAT
GACGGCGGGC GCTGGAACAT GGTCGAGGAC AGTGAGGTCG CACAACTGGC CATGGCGGGG
GGGGCGGTAC GTTTCGGTGA AGCCACGCAG TACCAGCGCC TGACCCTTGG CAACTTGTCG
GGCAGTGGCA CGTTCATCAT GGATGCCGAT TTCAGTACAG GCGAAACCGA CTTCCTGGAC
ATCACCGGCA CGGCAACCGG CAACCATAGT CTGCTGGTCG GCAGCAGCGG CAATGAACCC
ACGCAGGAAA ACAGCCTGCA CCTGGTTCAT GCGGCGGCGG GGGATGCGCA GTTCTCGCTG
CTTAACGGCC CGGTGGACCT CGGGGCGTTC TCCTATAGCC TTGTGCAGCG CGGCAATGAC
TGGTTCCTGG ATGGCGCGAC CAAAACGATA AGCCCAGGTA CCGAGGCGGC CATGGCCTTG
TTCAATACTG CGCCCACGGT GTGGTACGGC GAGTTGTCTT CCCTGCGCAG CCGCATGGGT
GAGTTGCGGC TTGACGAGCG CAATGCGGGC CTGTGGGCCC GCAGCTATGG CAACAAATAT
AACGTTTCGG CCTCGACCGG TACGCCCTAC AGCCAAGTTC AGCAGGGCTT CTCGCTGGGG
GCCGATACGC CGTTGCCGTG GGGCGATGGT CAATGGCTGG CCGGGGTTAT GGCGGGCTAC
AGCAGCTCAG ACCTGAACCT GACCCGAGGC GCTTCGGGCG AGGTGAAAAG CTATTACCTG
GGGCTGTATG CCACTTGGCT GGATGCCCAG ACCGGCTATT ACCTCGACAG CGTGGTCAAG
CTGAACCGCT TCGACAACCA GGCCAAGGTA AGTCTCAGTG ATGGCCAGCG TACCGAGGGC
GATTATGACA ACGTTGGCGT GGGGGCGTCG GTAGAGTTCG GTCGCCACCT GGCGCTGAAT
GATGGCTATT TCGTCGAGCC TTTCGGGCAA CTGTCGGTCG TTGGTATCCA GGGCAAGGAC
TACCACCTGG ACAATGGCTT GAAGGCCGAC GGTGATACGA CGCACTCGGT GCTGGGCAAG
GCCGGCGCCA CGGCGGGGCG TACCTTGAAG CTTGAGGGTG GGCAGTGGCT GCAACCTTAT
GTGCGCCTGG CTTATGTGCA CGAATTCGCC AACAACAACC TGGTCAAGGT CAACGATCAC
CGTTTCGACA ACGACCTGTC AGGCTCGCGC GCGGAGCTAG GCATGGGGGT AGCGGTATCG
CTGACGGAGC GCCTGCAACT GCATGCCGAT TTCGACTACA GCAATGGCAA GGCGCTGGAA
CAACCTTGGG GTGCCAACCT GGGCGTGCGT TACAGCTGGT AA
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| Protein sequence | MIKRRNFTLS PLASAIGQLL LGASAVLFTG PAGALTLVDD EQQIGASTPV DSYRVNDGGR
LVAEGATTQQ IDVRTGGGLQ LEGSTVSATG VAAVMVNGGA SATIANGSRL TSNLFGLDVL
RSATAGSTVS VTGSHIEGGV GGARVAGSSH LSLTDSTLVS TGAAGAALLF GDARLDATNS
QLTSATDGIR VVGDALSTEA ASLNLQGSRV EGQNGAAIRV GSANQAPGDA AITISGGTTL
VGSNGNLLEV ANGSNATMLV EGSNLVGDVL VEDGSSAKLT LGNQASLTGR LTNVESLALN
DGGRWNMVED SEVAQLAMAG GAVRFGEATQ YQRLTLGNLS GSGTFIMDAD FSTGETDFLD
ITGTATGNHS LLVGSSGNEP TQENSLHLVH AAAGDAQFSL LNGPVDLGAF SYSLVQRGND
WFLDGATKTI SPGTEAAMAL FNTAPTVWYG ELSSLRSRMG ELRLDERNAG LWARSYGNKY
NVSASTGTPY SQVQQGFSLG ADTPLPWGDG QWLAGVMAGY SSSDLNLTRG ASGEVKSYYL
GLYATWLDAQ TGYYLDSVVK LNRFDNQAKV SLSDGQRTEG DYDNVGVGAS VEFGRHLALN
DGYFVEPFGQ LSVVGIQGKD YHLDNGLKAD GDTTHSVLGK AGATAGRTLK LEGGQWLQPY
VRLAYVHEFA NNNLVKVNDH RFDNDLSGSR AELGMGVAVS LTERLQLHAD FDYSNGKALE
QPWGANLGVR YSW
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