| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1455 |
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| Symbol | |
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| ID | 5869225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1624678 |
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| End bp | 1627203 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546564 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001667698 |
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| Protein GI | 167032467 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0886847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC CCTTCAAACA CCAGCAGGCG CTGTCACGCC TGCGCTTTTC CACCCTTCCC
GCTCTCAGCG CAAGCCTGCT GAGCATGCCG GCCCTGGCCG CCCCCGCCGA CCTGCAGTTC
GAGCCCGGCT TCATTCGCCA AAGCCCAGGC CAACCCGCCG ATGCCGGCGC CCTCGCGCTG
CGTGCCCTGG CCGAGCAGCG CCCACTCGCC GCCGGCCGCT ACAGCCTGGA GCTGTACCTG
AACCTCAGCC CCTTGGGCAA ACGGGACATC ACCCTCGACG ACAGCCGCGA TGGGCAAACC
CTGGCGCCAT GCCTGAGTGC CGATCTGCTG GATGAAATCG GTGTGCGCGA ACAACACCTG
GGCGCCAGGC AACCCGGCGA TGAAGGCCAC TGTATCGACC TGCCCACGCA ACTGGCCGGC
GCCAGTGCCG ACCTGGATGC GGGCAAGTTG CGCCTGAACC TGTCGATACC ACAGTTCTAC
CTGCGCCGCG ATACCAGCGG CGCCATTGCC GAGCACCACT GGGACGAAGG CATAAACGCC
GCCTTCGTCA ATTACCAGGC CTCGGCCCAG CACAGCAACC GCCGCGGTAA CGGCACCCAC
AACAGCCATG ACCTGTACCT GAACAGCGGC GTCAACCTGT ACGGCTGGCG TCTGCGCAGC
CAGCAGGCGC TGCGCGAAAA CCGGCAGGGC GAGCTGCGCT GGACGCGCAC CAATACCTAT
GCCCAACGCG ACCTGCCGGC ACGCTGGGGT ACCCTCACCC TCGGCGAAAC CTTTACTCAA
GGCGAGGTGT TCCGCAGCTT GCCGTTCAAA GGCGTGAAAC TGGCCTCCGA CACCGAGATG
CTGCCAGACG CCATGCAAAA TTACGCCCCC GTGTTGCGCG GCGTGGCGCA AACCTACGCC
AAGCTTGAGG TGCTGCAGAA CGGTTACCCA CTCTATTCCA CCTTCGTCGC CCCTGGCCCA
TACGAAATCG ACGACCTGGC CGTGGGCGCC AGCAGCGGTG AGCTGGAAGT GGTTCTGACC
GAAGCCGATG GCCAGGTGCG CAACTTCATC CAACCCTACT CCACCCTGGG CAACCTCATG
CGCGCAGGCG TGTGGCGCTA CGACCTGGCC CTGGGCCGCT ACCACGGCGC ATACGAGGCC
GACACCCCCG CGTTGTGGCA AGGCACGCTG GCCCGCGGTA TGGGGTGGGA AAGCACGCTG
TACGCTGGCG TGCTCGGGGG TGACTACTAC CGCGCCGCCA CCCTCGGCCT TGCGCGCGAC
TTCGGGGCGT TTGGCGCGCT ATCGCTGGAC GCCACCCAGG CCACCAGCGA CCTTGGCCCA
GCACTGGGCC AAGTGCAAGG CAACAGTTTT TCGGCCCGCT ACGGCAAGGC CTTCGACAGC
GGAACCAACC TGCGCTTCGC CGGCTATCGC TATTCCACTG TCGGCTACCG CGACTATGAC
GAGGTGGTGC AGCAACGCAA CGCCTCCGAT CACTACCTGG GCAACCGCCG CAGCCGGCTG
GAAGCCTCGG TGTACCAGCA CTTCGGCAGC GCCGGCAGCC TCAGCCTGAC CCTGTCGCAG
GACGACTACT GGCACAACAG CCTGCAACGG CGCCAGTACC AGGCGCAATA CAACACGCAG
CTACCGCACA ATATCAGCCT CAACCTGTTC GCCTCGCAGT CGCTCAATTC GTCGCGCCAC
AACGACCGCA TCATCGGCCT GAGCCTAAGC CTGCCCCTGG ACTTCAAGCA CGCCTCCAGC
GCGACCTTCG ACATGCAGCA CAGCGCTGGC AAGCACAGCG AACGCGCCAG CCTCAGTGGC
CACTTCGATG ACCGGCGCCT GAACTACCGC GCCACGCTGG CCAACGACAC CCAGCAAAGT
GGCAGCCTGT CGTTGGCCTA CCAGGGCAGC CATGCCAACT ACGGCATGGG TTACAGCGAG
TCCGCCGATT ACCGCAACCT ATCGCTGAGC AGCAGCGGTG CCCTGCTGGC GCACGGCGGC
GGCATGCTGC TGGCGCCGTT CATGGGTGAA ACCAATGCCG TGGTGCATGT GCCGGGCATC
GAAGGGGTTG GCGTGGGCCA GGCACAACAG GGCAAGACCA ACCCTGCGGG CTATGCACTG
GCACCGTACA TGCGCCCCTA TCGGGCCAAC CAGCTGGTAC TGCAACTGGA CCAGCTCGAC
CCGGAAATCG AAATCGACAA CGGCACCACG CAGGTGGTGC CACGCCGCGG CGCCGTGGTG
CTCGCCAAGT TCCCGGCGCG CCGGGTCAAC CGCCTGGTAC TGACCCTGTT GCAAGCAGAC
GACCGCCCCC TGCCCTTCGG CGCACAGGTC AGCGATGCCC AGGGCCAGGT ATTGGCCGTG
GTCGGCCAAG GCGGCCAGGC ACTGGTCGCC ACCCACCTCG AGCAGCAGCA ACTGCTGGCC
AGGTGGACGG CGGGCAGCGA GCAGCAATGC CGCTTCGATA TCACCCCCGC CACCTTGCCG
CTTGAACAAG GCTATCGCCT GCAAACCTTG CGCTGCGAAG CTTCTTCCGA CTGGAACCGC
CAATGA
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| Protein sequence | MLKPFKHQQA LSRLRFSTLP ALSASLLSMP ALAAPADLQF EPGFIRQSPG QPADAGALAL
RALAEQRPLA AGRYSLELYL NLSPLGKRDI TLDDSRDGQT LAPCLSADLL DEIGVREQHL
GARQPGDEGH CIDLPTQLAG ASADLDAGKL RLNLSIPQFY LRRDTSGAIA EHHWDEGINA
AFVNYQASAQ HSNRRGNGTH NSHDLYLNSG VNLYGWRLRS QQALRENRQG ELRWTRTNTY
AQRDLPARWG TLTLGETFTQ GEVFRSLPFK GVKLASDTEM LPDAMQNYAP VLRGVAQTYA
KLEVLQNGYP LYSTFVAPGP YEIDDLAVGA SSGELEVVLT EADGQVRNFI QPYSTLGNLM
RAGVWRYDLA LGRYHGAYEA DTPALWQGTL ARGMGWESTL YAGVLGGDYY RAATLGLARD
FGAFGALSLD ATQATSDLGP ALGQVQGNSF SARYGKAFDS GTNLRFAGYR YSTVGYRDYD
EVVQQRNASD HYLGNRRSRL EASVYQHFGS AGSLSLTLSQ DDYWHNSLQR RQYQAQYNTQ
LPHNISLNLF ASQSLNSSRH NDRIIGLSLS LPLDFKHASS ATFDMQHSAG KHSERASLSG
HFDDRRLNYR ATLANDTQQS GSLSLAYQGS HANYGMGYSE SADYRNLSLS SSGALLAHGG
GMLLAPFMGE TNAVVHVPGI EGVGVGQAQQ GKTNPAGYAL APYMRPYRAN QLVLQLDQLD
PEIEIDNGTT QVVPRRGAVV LAKFPARRVN RLVLTLLQAD DRPLPFGAQV SDAQGQVLAV
VGQGGQALVA THLEQQQLLA RWTAGSEQQC RFDITPATLP LEQGYRLQTL RCEASSDWNR
Q
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