Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1450 |
Symbol | |
ID | 5869215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1617867 |
End bp | 1620224 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546554 |
Product | histidine kinase |
Protein accession | YP_001667693 |
Protein GI | 167032462 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.106734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.251272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCGC AGCGCAAGGA ACGTGAAACC GGCTCGGGAC TCATGGATAT CAAGTTCACC AATCGCCTGT CATACAAGCA AGCCCGGTTG ACAGTCCTGG TCGGCTTCAT CCTGGGAACA TTGCTCAGTC TCATCCAGAT CGGCATCGAT TATGCCAGCG AAGACGCGTC CATCAACCGT GAAGTGCGCG CCTTGCTGCA AATCAGCCAC AACCCGGCCT CGCGCATTGC CTACAACATC GATTCCGAGC TGGCGTTGGA GCTCACCCGG GGCCTGCTGC AGTCGCCGGC CATCATCCGC GCCCGGCTGA TCGACAACAA CGAAACGGTG CTGGCCGATG TCGAGCGGCC AAGGCTGCAG GACCGCTACC GGCTCCTCAG CGACTTCCTG TTTGGTGAGC AGCGCCAGTT CAAAGAGCGC CTGTTCCTGA CCCATATGCC AGAGGAATAC CTTGGCACCC TGTATCTGGA CGTCGACACC TACGCCTTCG GCAGCCGCTT TCTCGACCGT GCCGGCATCA CCCTGCTCAA CGGCTTCGCC CGCAGCCTGG TGCTGACCGG CATCCTGCTG GCGCTGTTCT ACATGATGCT GACCAAGCCG CTGGTGACGG TGATCGGTGC GCTCAGCGGC AGCGACCCGC GCAAACCCCG GCAAACGCGC CTGGAATGCC CGCATGGTCA TGAGCACGAC GAAATCGGCG TGCTGGTGAA GGTCGCCAAC CAGCAGTTCG TCAGCATGGC CACCGAAATT GAACAGCGGC GCACGGCAGA AAACCGCCTG ACCCAGTACC TGAACGAACT GGAAGACATC GTGTCGGCGC GCACCGACGA GCTGAAAGCC AGCAACAGCA GCCTCAGCCT GTCCAACCAG GAGCTGGAGC AAGCCCGCCG CCGCGCGCTG GACATGGCCC AGGCACGCGC CGCCTTCCTG GCCAACATGA GCCACGAAAT CCGCACCCCG CTCAACGGCA TGCTTGGCAT GATCGCCCTG GCGCTGGACA ACCCGCTGCC CAGTGAACAA CGCCAGCAAC TGGCAATTGC CCACGATTCG GGCAAGGTGC TGGTGGAGCT GCTGAACGAT ATTCTCGACC TGTCCAAGTT CGATGCTGGC CAGCTGGAGC TGGAGCGTAT CCCCTTCGAC ATGGGGTCGA TGGTGGAAGA CACCGCCAAC CTGCTGTCGC AGAACACCGC GCAAAGCGTG GAACTCACGT GCCTTATCGC CAGCGACTTC CCTAGCAGCG TGCTCGGCGA CCCCACGCGG GTGCGGCAGA TCGTCAGCAA CCTACTGTCC AACGCGCTCA AGTTCACCCG CTTCGGTCGC GTCGATGTGC GCCTGGTGAC GATCGTCGGC GGTGTGCGCC TGGAGGTGCG TGACACGGGC ATCGGCATAC CGGAAGAAGC CCAGGCGCGC ATCTTCCAGC CCTTCACCCA GGCCGGTGCC GGCATTACCC GCCAGTACGG CGGCACCGGC CTGGGCCTGG CGCTGACGCG CAACCTGTGC AAGGCCATGC AGGGCCACCT GCACATTCGC TCCGAGCCGG GCTTTGGTAG CTGCTTTACC GCCGAATTAC CGCTGGCCGT GCACACCGAA GCCATCCCGC CGGTGCCCCT GCATGGCCAC GTGGCCGCCC TGAGCGCAGG CGGTAGCGGG CTTGATGAAC TGCTGCAGAA CTTGCTGCCC GCCTGGGGCC TGACCTACCA GCGCCATGAC AGCAGCGCCA CGCTGGACGG CGCCGCGATC GACCTGTTGA TCAGCGACGA TGTGGACCAC CTGTTCGAAC TGCGCCAGGC ACTGAAAACC CCGATACTGC TGGTGACCGC CTACGGCAAC TTCCTGCCCA ACGAGCAGTC GCTGGCCTTG GCCCCGTTGC ATCAGCTGGC CCGGCCACTG GCGCGCAACG CCCTGTACCA GACGTTGCGC CGCACCTTGC AAGGCCATGA GCCCGAACAC CCGCTGGCCA CCCCGGCCAT TACCCTGGAG CAAGGCCGCG CGCGGATTCT GCTGGTAGAG GACAACCCGG TAAACCAGTT GGTAGCCAAG GGCATGCTTG CCAAGCTTGG CTGCCAGGTG CAACTGGCCA CCCAGGGCGC CGAGGCGCTG GAACTGTTGC AGCATGACGA CTTCGACCTG GTGCTGATGG ACTGCAACAT GCCGGTGATG GATGGCTACG AGGCCAGCCG GCGCATCCGA CAGAGCGGCC GCTGGCCCGA ACTGCCAATC GTTGCCCTCA CCGCCAACGC CATGCCCGAG GAGCGCGAAC GCTGCCGAGC GGCAGGCATG AACGACTACC TGGCCAAGCC GTTTCGCCGC GAAGAGCTAC TGGCCCTGAT CGACCACTGG GTGCCGCTCA ACGGCTGA
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Protein sequence | MLAQRKERET GSGLMDIKFT NRLSYKQARL TVLVGFILGT LLSLIQIGID YASEDASINR EVRALLQISH NPASRIAYNI DSELALELTR GLLQSPAIIR ARLIDNNETV LADVERPRLQ DRYRLLSDFL FGEQRQFKER LFLTHMPEEY LGTLYLDVDT YAFGSRFLDR AGITLLNGFA RSLVLTGILL ALFYMMLTKP LVTVIGALSG SDPRKPRQTR LECPHGHEHD EIGVLVKVAN QQFVSMATEI EQRRTAENRL TQYLNELEDI VSARTDELKA SNSSLSLSNQ ELEQARRRAL DMAQARAAFL ANMSHEIRTP LNGMLGMIAL ALDNPLPSEQ RQQLAIAHDS GKVLVELLND ILDLSKFDAG QLELERIPFD MGSMVEDTAN LLSQNTAQSV ELTCLIASDF PSSVLGDPTR VRQIVSNLLS NALKFTRFGR VDVRLVTIVG GVRLEVRDTG IGIPEEAQAR IFQPFTQAGA GITRQYGGTG LGLALTRNLC KAMQGHLHIR SEPGFGSCFT AELPLAVHTE AIPPVPLHGH VAALSAGGSG LDELLQNLLP AWGLTYQRHD SSATLDGAAI DLLISDDVDH LFELRQALKT PILLVTAYGN FLPNEQSLAL APLHQLARPL ARNALYQTLR RTLQGHEPEH PLATPAITLE QGRARILLVE DNPVNQLVAK GMLAKLGCQV QLATQGAEAL ELLQHDDFDL VLMDCNMPVM DGYEASRRIR QSGRWPELPI VALTANAMPE ERERCRAAGM NDYLAKPFRR EELLALIDHW VPLNG
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