Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1448 |
Symbol | |
ID | 5869213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1616980 |
End bp | 1617375 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546552 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_001667691 |
Protein GI | 167032460 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.03902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.443778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TCGAAAAAAC CCTGGATGAA TGGCGGTCGA TGCTCGACCC TGAGCAATAC CAGGTATGCC GCCTCAAGGG CACCGAGCGG CCATTCAGCG GCAAGTACAA CAGCGAACGC CGCGACGGCA TCTACCACTG CATCTGCTGC AACCTGCCAC TGTTCGACGC GCAAACCAAG TTCGACTCTG GGTGCGGTTG GCCGAGCTTC TACGCGCCGA TCGAAGACAG CGCGATGATC GAGATCCGCG ACACTTCCCA CGGCATGATC CGCACCGAAG TCACCTGCGC CCGTTGCGAC GCGCACCTGG GGCACGTGTT CCCCGATGGC CCGGCACCGA CCGGCCTGCG CTACTGCATC AACTCGGTGT GCATCGACCT GCGCCCACGC GACTGA
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Protein sequence | MKKIEKTLDE WRSMLDPEQY QVCRLKGTER PFSGKYNSER RDGIYHCICC NLPLFDAQTK FDSGCGWPSF YAPIEDSAMI EIRDTSHGMI RTEVTCARCD AHLGHVFPDG PAPTGLRYCI NSVCIDLRPR D
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