| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1447 |
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| Symbol | |
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| ID | 5869212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1615601 |
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| End bp | 1616812 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546551 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_001667690 |
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| Protein GI | 167032459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0541953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.418968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AATGTCTGCT ACGACATTCG CGGCCCAGTG
CTCAAGCACG CCAAACGTCT GGAAGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC
AACCCGGCGC CGTTTGGCTT CGAGGCGCCC GATGAAATCC TCCAGGATGT GATCCGCAAC
CTGCCCACCG CCCAGGGCTA CAGTGACTCC AAGGGCCTGT TCAGCGCGCG CAAGGCGGTG
ATGCAGTACT GCCAGCAAAA GGAAATCGAA GGCGTCACCA TCGAGGACAT CTACCTCGGC
AACGGTGTGT CCGAGCTGAT CGTCATGTCG ATGCAGGCGC TGCTGAACAA CGGCGACGAA
GTGCTGATCC CGGCCCCCGA CTACCCGCTG TGGACCGCCG CCGTGAGCCT GGCGGGCGGC
AAGCCGGTGC ATTACCTGTG CGACGAGCAA GCCGACTGGT TCCCCGACCT TGAAGACATC
AAGGCCAAGA TCACCCCGAA CACCAAGGCC CTGGTGATCA TCAACCCGAA CAACCCGACC
GGCGCCGTCT ACTCCAAAGA GCTGCTGCTG GGCATGCTGG AGCTGGCCCG CCAGCACAAC
CTGGTGGTGT TCTCCGACGA GATCTACGAC AAGATCCTGT ACGACGAAGC GGTGCACATC
AGCACCGCCT CGCTGGCACC CGACCTGCTG TGCCTGACTT TCAACGGCCT GTCCAAGTCG
TACCGAGTGG CGGGCTTCCG TTCCGGCTGG CTGATCATCT CCGGGCCGAA GCACCACGCC
CAGAGCTATA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTGCCG
GCCCAGCATG CCATCCAGAC CGCGTTGGGT GGCTACCAGA GCATCAACGA CCTGGTATTG
CCGCCAGGCC GCTTGCTAGA ACAGCGCAAC CGCACCTACG AGCTGCTCAA CGATATCCCG
GGGGTGAGCT GTGTGAAGCC GATGGGTGCG CTGTATGCAT TCCCGCGCAT CGACCCGAAG
GTGTGCCCGA TCCTCAACGA CGAGAAGTTC GCCCTTGACC TGCTGCTGTC GGAAAAACTG
CTGATCGTGC AAGGTACGGC GTTCAACTGG CCGTGGCCGG ACCACTTCCG CGTGGTCACC
TTGCCTCGGG TGGACGACCT GGAAGCGGCG ATTGGCCGGA TTGGCAATTT CCTGAAGGGG
TATTCGCAGT AA
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| Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN
LPTAQGYSDS KGLFSARKAV MQYCQQKEIE GVTIEDIYLG NGVSELIVMS MQALLNNGDE
VLIPAPDYPL WTAAVSLAGG KPVHYLCDEQ ADWFPDLEDI KAKITPNTKA LVIINPNNPT
GAVYSKELLL GMLELARQHN LVVFSDEIYD KILYDEAVHI STASLAPDLL CLTFNGLSKS
YRVAGFRSGW LIISGPKHHA QSYIEGIDML ANMRLCANVP AQHAIQTALG GYQSINDLVL
PPGRLLEQRN RTYELLNDIP GVSCVKPMGA LYAFPRIDPK VCPILNDEKF ALDLLLSEKL
LIVQGTAFNW PWPDHFRVVT LPRVDDLEAA IGRIGNFLKG YSQ
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