Gene PputGB1_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1446 
Symbol 
ID5869211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1614485 
End bp1615372 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID641546550 
Productheat shock protein HtpX 
Protein accessionYP_001667689 
Protein GI167032458 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0590674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.501086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA TTCTGTTGTT TGTAGCCACC AACCTTGCGG TGGTGCTGGT TGCAAGCATT 
ACCCTGAGCC TGTTCGGTTT CAACGGGTTC ATGGCCGCCA ACGGGGTCGA CCTGAACCTC
AGCAGCCTGC TGGTGTTCTG CGCCGTGTTC GGCTTTGCCG GCTCCCTCGT CTCGCTGTTC
ATCTCCAAGT GGATGGCGAA GATGAGCACC GGCACCCAGA TCATCAGCCA ACCGCGCACC
CGTCACGAAC AGTGGCTGCT GCAAACGGTC GAAGAGCTGT CCCGTGAGGC GGGCATCAAA
ATGCCCGAAG TGGGTATTTT CCCGGCCTAC GAGGCCAACG CCTTCGCCAC CGGCTGGAAC
CGCAACGACG CGCTGGTAGC CGTGTCCCAG GGCCTGCTGG AGCGCTTCTC GCCCGATGAA
GTGCGTGCGG TACTGGCCCA CGAAATCGGC CACGTCGCCA ACGGCGACAT GGTCACCCTG
GCGCTGGTGC AGGGTGTGGT GAACACCTTC GTGATGTTCT TTGCACGCAT CATCGGCAAC
TTCGTCGACA AGGTCATCTT CAAGAACGAA GAGGGCCAGG GCATTGCCTA CTATGTGGCG
ACCATCGTTG CCGAGCTGAT CCTGGGCATC CTGGCCAGCA TGATCGTGAT GTGGTTCTCG
CGCCGCCGCG AATACCGCGC CGACGAAGCC GGTGCGCAGC TGGCCGGCAC CTCGGCCATG
ATCGGTGCCT TGCAGCGCCT GCGCGTGGAA CAAGGCCTGC CCGTGCACAT GCCCGACACC
ATGAAGGCCT TCGGCATCAA TGGCGGCCTC AAGCACGGCC TGGCCGGGCT GCTGATGAGC
CACCCGCCGC TGGAAGACCG TATCGAGGCC CTGCGCCGTC GCGGTTGA
 
Protein sequence
MMRILLFVAT NLAVVLVASI TLSLFGFNGF MAANGVDLNL SSLLVFCAVF GFAGSLVSLF 
ISKWMAKMST GTQIISQPRT RHEQWLLQTV EELSREAGIK MPEVGIFPAY EANAFATGWN
RNDALVAVSQ GLLERFSPDE VRAVLAHEIG HVANGDMVTL ALVQGVVNTF VMFFARIIGN
FVDKVIFKNE EGQGIAYYVA TIVAELILGI LASMIVMWFS RRREYRADEA GAQLAGTSAM
IGALQRLRVE QGLPVHMPDT MKAFGINGGL KHGLAGLLMS HPPLEDRIEA LRRRG