Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1446 |
Symbol | |
ID | 5869211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1614485 |
End bp | 1615372 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546550 |
Product | heat shock protein HtpX |
Protein accession | YP_001667689 |
Protein GI | 167032458 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0590674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.501086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCA TTCTGTTGTT TGTAGCCACC AACCTTGCGG TGGTGCTGGT TGCAAGCATT ACCCTGAGCC TGTTCGGTTT CAACGGGTTC ATGGCCGCCA ACGGGGTCGA CCTGAACCTC AGCAGCCTGC TGGTGTTCTG CGCCGTGTTC GGCTTTGCCG GCTCCCTCGT CTCGCTGTTC ATCTCCAAGT GGATGGCGAA GATGAGCACC GGCACCCAGA TCATCAGCCA ACCGCGCACC CGTCACGAAC AGTGGCTGCT GCAAACGGTC GAAGAGCTGT CCCGTGAGGC GGGCATCAAA ATGCCCGAAG TGGGTATTTT CCCGGCCTAC GAGGCCAACG CCTTCGCCAC CGGCTGGAAC CGCAACGACG CGCTGGTAGC CGTGTCCCAG GGCCTGCTGG AGCGCTTCTC GCCCGATGAA GTGCGTGCGG TACTGGCCCA CGAAATCGGC CACGTCGCCA ACGGCGACAT GGTCACCCTG GCGCTGGTGC AGGGTGTGGT GAACACCTTC GTGATGTTCT TTGCACGCAT CATCGGCAAC TTCGTCGACA AGGTCATCTT CAAGAACGAA GAGGGCCAGG GCATTGCCTA CTATGTGGCG ACCATCGTTG CCGAGCTGAT CCTGGGCATC CTGGCCAGCA TGATCGTGAT GTGGTTCTCG CGCCGCCGCG AATACCGCGC CGACGAAGCC GGTGCGCAGC TGGCCGGCAC CTCGGCCATG ATCGGTGCCT TGCAGCGCCT GCGCGTGGAA CAAGGCCTGC CCGTGCACAT GCCCGACACC ATGAAGGCCT TCGGCATCAA TGGCGGCCTC AAGCACGGCC TGGCCGGGCT GCTGATGAGC CACCCGCCGC TGGAAGACCG TATCGAGGCC CTGCGCCGTC GCGGTTGA
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Protein sequence | MMRILLFVAT NLAVVLVASI TLSLFGFNGF MAANGVDLNL SSLLVFCAVF GFAGSLVSLF ISKWMAKMST GTQIISQPRT RHEQWLLQTV EELSREAGIK MPEVGIFPAY EANAFATGWN RNDALVAVSQ GLLERFSPDE VRAVLAHEIG HVANGDMVTL ALVQGVVNTF VMFFARIIGN FVDKVIFKNE EGQGIAYYVA TIVAELILGI LASMIVMWFS RRREYRADEA GAQLAGTSAM IGALQRLRVE QGLPVHMPDT MKAFGINGGL KHGLAGLLMS HPPLEDRIEA LRRRG
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