Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1438 |
Symbol | |
ID | 5869203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1606010 |
End bp | 1606861 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546542 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001667681 |
Protein GI | 167032450 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.371072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.234333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGT ACCAGAGCCT CGATGCGGAC GTGCTGCGCA CCTTCGTCGC CATCGCCGAG CAAGGCGGCT TCACCCGCGC CGGTGAGGTG GTCAACCGCA CCCAGTCGGC GGTAAGCATG CAGATGAAAC GCCTGGAAGA AGACATCCTG CAGCGCCAAC TGTTCGAGCG CGATGGCCGC CAGGTAAGGC TGACCGCCGA AGGCCAGGTG CTACTGGGCT ATGCCCGGCG CATCCTCAAG CTGCACGGCG AAGTGTTCAA CACCCTGCGC ATGCCGCACA TGGTCGGGCT GGTGCGCATC GGCACACCAG ACGACTACGC CATGCGTTTC CTGCCGACCA TACTTTCGAG CTTTGCCCAG GCCTACCCGC TGGTGCAGGT GGAGGTGCAC TGCGACTCCT CCAAGCAGCT GATGCTGCGC CAGGACCTGG ACCTGACCAT CGTCACCCGC GAGCCGGGCA ACGAGGTTGG CCAACTGCTG CGTCAGGAAC GCCTGGTGTG GGCTGCCGCC GAAGGCTTTT GCCCACAGGA ACAGCGGCCG ATGCCGGTGG CGCTGTTCAA CACTGATTGT TTCTGCCGGG CCTGGACCTG CAATGCCCTG GAAGCCCAGG GCATTGATTA CCGCATTGCC TACACAAGCC CCAGCTTGGC GGCGATCTTT GCCATAGTCA CGGCCGGCTT GGCCGTGACG GCGCAGTTGC AAAGCCTGAT TGGCGGAAAC ATTCGCATAC TGGGTGAACA GGATGGGCTA CCGCAGCTGC CAGTGGCCAA TGTGATGCTG GTGCGCGGTA CTCAGCACCC TTCGCCTATT ACCGATTGCA TGGCGGACTA TATCGTCGAA GGGTTCAAGT AA
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Protein sequence | MSQYQSLDAD VLRTFVAIAE QGGFTRAGEV VNRTQSAVSM QMKRLEEDIL QRQLFERDGR QVRLTAEGQV LLGYARRILK LHGEVFNTLR MPHMVGLVRI GTPDDYAMRF LPTILSSFAQ AYPLVQVEVH CDSSKQLMLR QDLDLTIVTR EPGNEVGQLL RQERLVWAAA EGFCPQEQRP MPVALFNTDC FCRAWTCNAL EAQGIDYRIA YTSPSLAAIF AIVTAGLAVT AQLQSLIGGN IRILGEQDGL PQLPVANVML VRGTQHPSPI TDCMADYIVE GFK
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