Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1436 |
Symbol | |
ID | 5869201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1604162 |
End bp | 1605115 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641546540 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001667679 |
Protein GI | 167032448 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.634744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.320614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCG ATACCCTGAC CGACCAACTG AGCCTGTTCC TCGATGTGCT GGAAACCGGC AGCTTTTCTG CCGCCGCTCG TCGCCACCCG CTGACGCCTT CTGCGGTAGC CCGGCGCATC GACAACCTTG AAAGTGCCGT CGGCAGCCGC CTGTTCACTC GTAGCACCCA CGCCGTGCGG GCCACTCCTG CCGGCAATGC ATTTGCCGAG CGGGCCAGGC GCATCATCGA GGAACTGCGC CTGGCCCGAG CCGAAGCGGT GTCGCTGAGC AACGCCCCCG AAGGGCTGAT CCGCATTGAC GCCCCCGCCG CGTTCGGCCG CCGCCACCTG GCCCCGGCGA TTGCCGACTT CCTGGTGGCC TACCCAGGCC TGGACGTGCA ACTGCGCCTG ATCGACAGCT TCGTCGACCT GCATGGCAGC CACCTGGGCG AGGTCGACCT GGTACTGCGC GCCGGCCCCT TGGCCGACAC CCGCCTGGTC GCCACGCCGC TGGCCTACAT GGTGCGTATC GCCTGTGCCA GCCCCGCCTA CCTGGCCAGC CGCGGCATAC CCACCTGCCC CAGCGAACTG CCAGGGCATG ACGGGCTGGA CTGGGACGGC CTGGCGCCGC CGTTTGCCTG GCGCTTCAGC GTGGCCGGGC AAACCCGCCT GTACCGCCCC GCACGCATGC GCATGGCCGC CAACAACGCC GAAACCCTGT TGTTCGGCGC CCTCGCCGGC TTAGGCATAG CCCACCTGCC CACCTGGCTC ATCAGCGAAT ACCTGCTGCG CGGCGAGTTG ATCCCGTTGT TTTGCGAGGG CGGCCTGCCG GAAGCCGAGA GCAGTGGTAT TTACGCGCTA CGCCTGGAAC ACGAAACGAA CTCTCGCAGC CGTTTGCTGC TCGAATTCCT CAAGAGCCGC TTCAGCCCGA TTCCACCCTG GGACCTGGCT TTACGCAGTG AACTGCGCGA GTAA
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Protein sequence | MSPDTLTDQL SLFLDVLETG SFSAAARRHP LTPSAVARRI DNLESAVGSR LFTRSTHAVR ATPAGNAFAE RARRIIEELR LARAEAVSLS NAPEGLIRID APAAFGRRHL APAIADFLVA YPGLDVQLRL IDSFVDLHGS HLGEVDLVLR AGPLADTRLV ATPLAYMVRI ACASPAYLAS RGIPTCPSEL PGHDGLDWDG LAPPFAWRFS VAGQTRLYRP ARMRMAANNA ETLLFGALAG LGIAHLPTWL ISEYLLRGEL IPLFCEGGLP EAESSGIYAL RLEHETNSRS RLLLEFLKSR FSPIPPWDLA LRSELRE
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