Gene PputGB1_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1409 
Symbol 
ID5869173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1580414 
End bp1581568 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID641546512 
Productmajor facilitator transporter 
Protein accessionYP_001667652 
Protein GI167032421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.387878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA TCCCCTACTG GCGCTTGTCC AGCTTCTACC TGTTCTACTT CGCCCTGCTA 
GGCTCCACCG CCCCCTTCCT GGCGCTGTAC TTCGACCACC TGGGTTTTTC CCCGGCACGC
ATCGGCGAGC TGGTGGCCAT CCCCATGCTG ATGCGCTGCA TCGCCCCCAA CCTGTGGGGC
TGGCTGGGCG ACCGTACCGG CCAGCGGTTG TTGATCGTGC GGTTGGGCGC GTTGTCGACA
CTGGCCACCT TCGCCCTGAT CTTCTTCGGC AAAAGCTACG CCTGGCTGGC ACTGGTGATG
GCCCTGCACG CGTTCTTCTG GCATGCGGTG CTGCCGCAGT TCGAAGTCAT CACCCTGGCC
CACCTGCACG GGCAAACGTC GCGCTACAGC CAGGTGCGCC TGTGGGGCTC GATTGGCTTC
ATTCTCACGG TAGTTGGCCT GGGCCGCTTG TTCGAATGGC TGAGCCTGGA TATCTACCCG
GTGGCGCTGG TCACGATCAT GGCTGGCATC GTCGCCGCCA GCCTGTGGGT ACCCAATGCC
CAGCCGCTGG AGCAGGGCGA GCGCAGCGGC GCGGGTGGCT TCCTGCAGCA GTTGCGTGCC
CCGGGGGTGA TGGCGTTCTA CGCCTGCGTG GCGTTGATGC AGCTCAGCCA CGGGCCGTAT
TACACGTTCC TTACCCTGCA CCTGGAGCAC CTGGGCTACA CGCGCGGTGC CATTGGCCTG
TTGTGGGCGC TGGGGGTAGT GGCCGAGGTG CTGATGTTCA TGGTCATGAG CCGCCTGTTC
GCCCGTTTCA GCGTGCAGCG GGTGTTGCTG GCCAGCTTCC TGCTGGCGGC CATACGCTGG
TTGTTGCTGG GCAATCTGGC AGGTGAGCCG GCCGTGCTGA TATTCGCCCA GTTGCTGCAT
GCGGCCACTT TCGGCTGCTT CCATGCCGCC AGCATTGCCT TTGTGCAGGC CAGCTTCGGC
GCCCGTCAGC AGGGCCAGGG CCAGGCGCTG TACGCGGCGC TGTCGGGTAC CGGCGGTGCG
CTGGGGGCGT TGTACTCAGG CTACAGCTGG AAGCTGTTGG GCCCCACCTT CACCTTTGGT
ATGGCCAGTG CCGCAGCCTT GGCCGCAGCC GTTATCATTG CCCTTCGTTC GCAATCGACC
AGGACCCGCC CCTGA
 
Protein sequence
MQPIPYWRLS SFYLFYFALL GSTAPFLALY FDHLGFSPAR IGELVAIPML MRCIAPNLWG 
WLGDRTGQRL LIVRLGALST LATFALIFFG KSYAWLALVM ALHAFFWHAV LPQFEVITLA
HLHGQTSRYS QVRLWGSIGF ILTVVGLGRL FEWLSLDIYP VALVTIMAGI VAASLWVPNA
QPLEQGERSG AGGFLQQLRA PGVMAFYACV ALMQLSHGPY YTFLTLHLEH LGYTRGAIGL
LWALGVVAEV LMFMVMSRLF ARFSVQRVLL ASFLLAAIRW LLLGNLAGEP AVLIFAQLLH
AATFGCFHAA SIAFVQASFG ARQQGQGQAL YAALSGTGGA LGALYSGYSW KLLGPTFTFG
MASAAALAAA VIIALRSQST RTRP