Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1409 |
Symbol | |
ID | 5869173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1580414 |
End bp | 1581568 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546512 |
Product | major facilitator transporter |
Protein accession | YP_001667652 |
Protein GI | 167032421 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.387878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA TCCCCTACTG GCGCTTGTCC AGCTTCTACC TGTTCTACTT CGCCCTGCTA GGCTCCACCG CCCCCTTCCT GGCGCTGTAC TTCGACCACC TGGGTTTTTC CCCGGCACGC ATCGGCGAGC TGGTGGCCAT CCCCATGCTG ATGCGCTGCA TCGCCCCCAA CCTGTGGGGC TGGCTGGGCG ACCGTACCGG CCAGCGGTTG TTGATCGTGC GGTTGGGCGC GTTGTCGACA CTGGCCACCT TCGCCCTGAT CTTCTTCGGC AAAAGCTACG CCTGGCTGGC ACTGGTGATG GCCCTGCACG CGTTCTTCTG GCATGCGGTG CTGCCGCAGT TCGAAGTCAT CACCCTGGCC CACCTGCACG GGCAAACGTC GCGCTACAGC CAGGTGCGCC TGTGGGGCTC GATTGGCTTC ATTCTCACGG TAGTTGGCCT GGGCCGCTTG TTCGAATGGC TGAGCCTGGA TATCTACCCG GTGGCGCTGG TCACGATCAT GGCTGGCATC GTCGCCGCCA GCCTGTGGGT ACCCAATGCC CAGCCGCTGG AGCAGGGCGA GCGCAGCGGC GCGGGTGGCT TCCTGCAGCA GTTGCGTGCC CCGGGGGTGA TGGCGTTCTA CGCCTGCGTG GCGTTGATGC AGCTCAGCCA CGGGCCGTAT TACACGTTCC TTACCCTGCA CCTGGAGCAC CTGGGCTACA CGCGCGGTGC CATTGGCCTG TTGTGGGCGC TGGGGGTAGT GGCCGAGGTG CTGATGTTCA TGGTCATGAG CCGCCTGTTC GCCCGTTTCA GCGTGCAGCG GGTGTTGCTG GCCAGCTTCC TGCTGGCGGC CATACGCTGG TTGTTGCTGG GCAATCTGGC AGGTGAGCCG GCCGTGCTGA TATTCGCCCA GTTGCTGCAT GCGGCCACTT TCGGCTGCTT CCATGCCGCC AGCATTGCCT TTGTGCAGGC CAGCTTCGGC GCCCGTCAGC AGGGCCAGGG CCAGGCGCTG TACGCGGCGC TGTCGGGTAC CGGCGGTGCG CTGGGGGCGT TGTACTCAGG CTACAGCTGG AAGCTGTTGG GCCCCACCTT CACCTTTGGT ATGGCCAGTG CCGCAGCCTT GGCCGCAGCC GTTATCATTG CCCTTCGTTC GCAATCGACC AGGACCCGCC CCTGA
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Protein sequence | MQPIPYWRLS SFYLFYFALL GSTAPFLALY FDHLGFSPAR IGELVAIPML MRCIAPNLWG WLGDRTGQRL LIVRLGALST LATFALIFFG KSYAWLALVM ALHAFFWHAV LPQFEVITLA HLHGQTSRYS QVRLWGSIGF ILTVVGLGRL FEWLSLDIYP VALVTIMAGI VAASLWVPNA QPLEQGERSG AGGFLQQLRA PGVMAFYACV ALMQLSHGPY YTFLTLHLEH LGYTRGAIGL LWALGVVAEV LMFMVMSRLF ARFSVQRVLL ASFLLAAIRW LLLGNLAGEP AVLIFAQLLH AATFGCFHAA SIAFVQASFG ARQQGQGQAL YAALSGTGGA LGALYSGYSW KLLGPTFTFG MASAAALAAA VIIALRSQST RTRP
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