Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1406 |
Symbol | |
ID | 5869170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1577307 |
End bp | 1578089 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546509 |
Product | hypothetical protein |
Protein accession | YP_001667649 |
Protein GI | 167032418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0179577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG CCCCCGCCGC CGTAGAGCCG GCCGAAGCCC CCCAGGAAAG CCCCGCCCTG CCCTGGGCCG AGCTTGCCGC CGAACACTTC CAGCTGCTGC GCCTGGCCGC ACTGCCCACC GACCGCAGCA CCGGCGCCCG GCCGCTGCGC TTTGTGCAGT TCGGCTATGC CGAGCGCCAT GACAAGGCGC ACAGCCTGCT GCGCATGGAA ATCCAACTGC CCGGCCAGAA GGTGCACAAA GAGCAGAACC GCCTGGACAT CCGTGTCGAC CATGCCGAGC GCCTGGTGCG CATTGGCAAT GAGCATGGCC TGCAACTGGA GCCCGTGAAC CGTGGCATCG GCCGCTTCAT GCTGGCCCAG GCGGCGCAGT GGCTGCAGCG CAAATGGTCG CACTACCAGG TAGTGGGCAT GGCGTTGCCG AGCAAGGATG CGCTGAACGA AGACTCCCGC CTGCGCCGTG ACAACTGCCT GCGCGGGGTA GGTATCGAGG TGGAATACGA GGACAGCCAG CACCTGAAGG GCCGTACCGT GGACATGACC GTCGGCCAGC TGAAGGCCGC CTGGAGCAAC GAGCGCCTGC AGCGGGTTGA CATTCTGGAT GCTGCCAACC TGTTGCAGCA GGCGGACCAG CAGTTGCAGG AAAAAGAAGC GCAACTGCGC GAGCGCGATG AGCGGGTGGC CAAGTACCAC CGCGAAGACA GCGGTTTGCG CTTCACCATT ACCTGCCTGG TGGCGTTTGC GGTGTTTCAG GCAGGGTTGT TGATCTGGAT TGCCACCCGC TGA
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Protein sequence | MTIAPAAVEP AEAPQESPAL PWAELAAEHF QLLRLAALPT DRSTGARPLR FVQFGYAERH DKAHSLLRME IQLPGQKVHK EQNRLDIRVD HAERLVRIGN EHGLQLEPVN RGIGRFMLAQ AAQWLQRKWS HYQVVGMALP SKDALNEDSR LRRDNCLRGV GIEVEYEDSQ HLKGRTVDMT VGQLKAAWSN ERLQRVDILD AANLLQQADQ QLQEKEAQLR ERDERVAKYH REDSGLRFTI TCLVAFAVFQ AGLLIWIATR
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