Gene PputGB1_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1406 
Symbol 
ID5869170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1577307 
End bp1578089 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID641546509 
Producthypothetical protein 
Protein accessionYP_001667649 
Protein GI167032418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0179577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CCCCCGCCGC CGTAGAGCCG GCCGAAGCCC CCCAGGAAAG CCCCGCCCTG 
CCCTGGGCCG AGCTTGCCGC CGAACACTTC CAGCTGCTGC GCCTGGCCGC ACTGCCCACC
GACCGCAGCA CCGGCGCCCG GCCGCTGCGC TTTGTGCAGT TCGGCTATGC CGAGCGCCAT
GACAAGGCGC ACAGCCTGCT GCGCATGGAA ATCCAACTGC CCGGCCAGAA GGTGCACAAA
GAGCAGAACC GCCTGGACAT CCGTGTCGAC CATGCCGAGC GCCTGGTGCG CATTGGCAAT
GAGCATGGCC TGCAACTGGA GCCCGTGAAC CGTGGCATCG GCCGCTTCAT GCTGGCCCAG
GCGGCGCAGT GGCTGCAGCG CAAATGGTCG CACTACCAGG TAGTGGGCAT GGCGTTGCCG
AGCAAGGATG CGCTGAACGA AGACTCCCGC CTGCGCCGTG ACAACTGCCT GCGCGGGGTA
GGTATCGAGG TGGAATACGA GGACAGCCAG CACCTGAAGG GCCGTACCGT GGACATGACC
GTCGGCCAGC TGAAGGCCGC CTGGAGCAAC GAGCGCCTGC AGCGGGTTGA CATTCTGGAT
GCTGCCAACC TGTTGCAGCA GGCGGACCAG CAGTTGCAGG AAAAAGAAGC GCAACTGCGC
GAGCGCGATG AGCGGGTGGC CAAGTACCAC CGCGAAGACA GCGGTTTGCG CTTCACCATT
ACCTGCCTGG TGGCGTTTGC GGTGTTTCAG GCAGGGTTGT TGATCTGGAT TGCCACCCGC
TGA
 
Protein sequence
MTIAPAAVEP AEAPQESPAL PWAELAAEHF QLLRLAALPT DRSTGARPLR FVQFGYAERH 
DKAHSLLRME IQLPGQKVHK EQNRLDIRVD HAERLVRIGN EHGLQLEPVN RGIGRFMLAQ
AAQWLQRKWS HYQVVGMALP SKDALNEDSR LRRDNCLRGV GIEVEYEDSQ HLKGRTVDMT
VGQLKAAWSN ERLQRVDILD AANLLQQADQ QLQEKEAQLR ERDERVAKYH REDSGLRFTI
TCLVAFAVFQ AGLLIWIATR