| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1404 |
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| Symbol | |
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| ID | 5869168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1575478 |
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| End bp | 1576068 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546507 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001667647 |
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| Protein GI | 167032416 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00231254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTC CAACCACGAT GTTCCGCCTC ACTGGCCGCG ACTACCCGCC GGCCAAGCTG
AGCCACGCCA GCCTGATCAT CATCGATGCG CAAAAGGAGT ACCTCAGCGG TCCCCTGCAG
CTGTCGGGCA TGGACGAGGC CGTGGCCAAC ATCGCCAGGT TGCTCGACGC CGCGCGTAAA
AGCGGCCGTC CGATCATCCA TGTTCGCCAC CTGGGCACTG TCGGTGGCCG CTTCGATCCA
CAGGGGCCGG CCGGCCAGTT CATTCCGGGG CTCGAGCCAC TGGAAGGCGA AATCGTCATC
GAAAAACGCA TGCCCAACGC ATTCAAGAAC ACCCAACTGC ACGAAACGCT GCAGGCGCTG
GGCCACCTGG ACCTGATCGT CTGTGGTTTC ATGAGCCACT CCAGCGTCAG CACTACCGTT
CGCCGCGCCA AGGACTATGG TTACCGGTGC ACCCTGGTGG AAGACGCCTC GGCCACCCGC
GACCTGGCCT TCAAGGACGG GGTGATCCCG GCCGCACAGA TTCACCAGTG CGAAATGGCC
GTGATGGCCG ACAACTTCGC TTGCGTGGCA CCCACCGCCA GCCTGATCTG A
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| Protein sequence | MSVPTTMFRL TGRDYPPAKL SHASLIIIDA QKEYLSGPLQ LSGMDEAVAN IARLLDAARK
SGRPIIHVRH LGTVGGRFDP QGPAGQFIPG LEPLEGEIVI EKRMPNAFKN TQLHETLQAL
GHLDLIVCGF MSHSSVSTTV RRAKDYGYRC TLVEDASATR DLAFKDGVIP AAQIHQCEMA
VMADNFACVA PTASLI
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