Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1402 |
Symbol | |
ID | 5869166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1574406 |
End bp | 1574966 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546505 |
Product | Smr protein/MutS2 |
Protein accession | YP_001667645 |
Protein GI | 167032414 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0771614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACG ACGATTTTTC CCTGTTCAAG GCCGAAGTGC GTGGCGTAAA GCAAATCCGC CACGACCGCG CCGAAGTCGG CAAGCCCAAG GCCGACCGCC AGAAACTGGC TGGCCTGCGC CAGGCGGCGA CCGTGCGCAG TGACAAGGCC CTGGTCATCG ACGGCATGTC CGACCTGTTC GTCATCGACG TAGGCGCCGA AGACGAACTG ATGTGGCGCC GCGACGGCGT GCAGGAAGGC CAGCTGCGCA AGCTCAAGCT GGGCCAGATC CCGTTCGAGG GCAGCCTCGA CCTGCACGGC ATGACCGTGG AAAAGGCCCG CGAAACCCTG TGGGACTTCA TCGCCGAAGC CACCAAACTG GAAGTGCGCT GCGTGCGGGT GACCCACGGC AAGGCCGCAC GCCTGGATGG CAAGCGCCCG ATGATCAAAA GCCACGTCAA CACCTGGCTG CGCCAGCACC CGCAGGTGCT CGGTTTTGCC TCCTGCAGCG CCCGCCATGG CGGCACTGGC GCGGTGTATG TGATGCTCAA GCGAACCATG CTCGAAGGCC GCGACGAGTA A
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Protein sequence | MQDDDFSLFK AEVRGVKQIR HDRAEVGKPK ADRQKLAGLR QAATVRSDKA LVIDGMSDLF VIDVGAEDEL MWRRDGVQEG QLRKLKLGQI PFEGSLDLHG MTVEKARETL WDFIAEATKL EVRCVRVTHG KAARLDGKRP MIKSHVNTWL RQHPQVLGFA SCSARHGGTG AVYVMLKRTM LEGRDE
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