Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1399 |
Symbol | |
ID | 5869163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1572687 |
End bp | 1573289 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546502 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001667642 |
Protein GI | 167032411 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.250488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGG TCTATGGCGA CTACCAGTCG GGCAACTGCT ACAAGGTCAA GCTGATGTTG AGCTTGCTGG GTCGGCCGTA TGAATGGCAC CCGGTGGACA TCCTCAAGGG CGAGACCGAA ACGCCCGAGT TTTTGGCGAT GAACCCCAAC GGCAAGGTGC CGGTACTGGA GCTGGAGGAC GGCAGCTACC TGTGGGAGTC CAACGCCATT CTCAACTTCC TGGCCGATGG CAGCGAGTTC CTGCCCAGCG AGCCGCGCCT GCGCACGCAG GTGTTGCAGT GGCAGTTCTT CGAGCAGTAC AGCCATGAGC CGTACATCGC CGTGGCGCGG TTCATCCAGT TTTACCTGGG GCTGCCCGAC GAGCGCCTGG AGGAGTACCG CAAGCTGCAC AAGGGCGGCT ACAAGGCGCT GAAGGTGATG GAGCGGCAGC TGCAGATGAC GCCGTACCTG GTGGGTGAGC AATACTCGAT TGCCGATGTG GCGTTGTATG CCTACACCCA TGTGGCGCAG CAGGGCGGTT TCGACCTGGC CGATTACCCG GCGGTAAGGG CCTGGCTGGA GCGGGTCAGC AGCCACCCAC GGCATGTGCC GATGGTGGGA TGA
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Protein sequence | MYKVYGDYQS GNCYKVKLML SLLGRPYEWH PVDILKGETE TPEFLAMNPN GKVPVLELED GSYLWESNAI LNFLADGSEF LPSEPRLRTQ VLQWQFFEQY SHEPYIAVAR FIQFYLGLPD ERLEEYRKLH KGGYKALKVM ERQLQMTPYL VGEQYSIADV ALYAYTHVAQ QGGFDLADYP AVRAWLERVS SHPRHVPMVG
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