Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1398 |
Symbol | |
ID | 5869162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1571351 |
End bp | 1572541 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546501 |
Product | benzoate transporter |
Protein accession | YP_001667641 |
Protein GI | 167032410 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATG CCACCTCCGC ACGCCTGCGG CCCCTGGCAG ACACCTCTCC GTCGGCTGTG GTTGCAGGCT TCATTGCCAT GCTCACCGGC TACACCAGTT CGCTGGTACT GATGTTCCAG GCCGGCCAGG CGGCCGGGCT GACCACTGCG CAGATTTCGT CATGGATCTG GGCGCTGTCC ATCGGCATGG CGGTGTGCAG CATCGGCCTA TCGCTGCGCT ATCGCACCCC CGTCACCGTG GCCTGGTCCA CCCCAGGCGC TGCCTTGCTG ATCACCAGCC TGGGCGGGGT CAGCTATGGC GAAGCCATTG GCGCCTATAT CACCTGTGCC GTACTGGTCC TCATCTGTGG CCTGACCGGC AGCTTCGAGC GCCTGGTCAA ACGCATTCCG GCCTCGCTGG CCTCGGCACT GCTGGCGGGC ATCCTGTTCA AGATCGGCAG CGAAATCTTC GTCGCCGCCC AGCACCGCAC GTTGCTGGTG CTGGGCATGT TCTTCAGCTA CCTGCTGGTC AAGCGCCTGT CGCCACGCTA CTGCGTACTG GCCGCGCTGT TGGTGGGCAC GGCATTGTCC GGCGCGCTGG GCCTGCTGGA CTTCAGCGGC TTCCACCTGG AAGTGGCCAA ACCAGTATGG ACCACACCCA GCTTCTCGTT GGCGGCAACC ATCAGTATCG GCATTCCACT GTTCGTAGTG GCCATGACCT CGCAGAACAT GCCCGGCGTG GCCGTGCTGC GTGCCGACGG CTACCAGGTG CCCGCCTCGC CGCTGATTTC GGCCACCGGC TTTGCCTCGC TGCTGCTGGC GCCATTCGGC TCGCATGGGG TCAACCTGGC GGCGATCAGC GCAGCGATCT GCACCGGGCC GCATGCCCAT GAAGACCCGA GCAAACGCTA CACCGCGGCG GTGTGGTGCG GGATTTTCTA CGGCATTGCC GGGGTGTTCG GGGCGACCTT GGCGGCATTG TTTGCGGCAT TGCCTAAGGA GCTGGTGCTG TCGATTGCCG CACTGGCGCT GTTTGGTTCG ATCATGAACG GGCTGACCGT GGCCATGAGC GAGGCGCGCG AGCGTGAGGC GGCGGTGATT ACCTTCATGG TCACGGCTTC GGGGTTGACC CTGTTCTCGA TAGGCTCGGC GTTCTGGGGG ATTGTGGCGG GGGTGCTGAC CTTGATGATC CTGAATCCGC GCAGGGGATG A
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Protein sequence | MTDATSARLR PLADTSPSAV VAGFIAMLTG YTSSLVLMFQ AGQAAGLTTA QISSWIWALS IGMAVCSIGL SLRYRTPVTV AWSTPGAALL ITSLGGVSYG EAIGAYITCA VLVLICGLTG SFERLVKRIP ASLASALLAG ILFKIGSEIF VAAQHRTLLV LGMFFSYLLV KRLSPRYCVL AALLVGTALS GALGLLDFSG FHLEVAKPVW TTPSFSLAAT ISIGIPLFVV AMTSQNMPGV AVLRADGYQV PASPLISATG FASLLLAPFG SHGVNLAAIS AAICTGPHAH EDPSKRYTAA VWCGIFYGIA GVFGATLAAL FAALPKELVL SIAALALFGS IMNGLTVAMS EAREREAAVI TFMVTASGLT LFSIGSAFWG IVAGVLTLMI LNPRRG
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