| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1394 |
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| Symbol | |
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| ID | 5869158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1566295 |
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| End bp | 1566996 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546497 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001667637 |
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| Protein GI | 167032406 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.228607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCT GCCAGACGCC CCTGATCGTC GCCCTGGATT TCCCTACCCG TGAGGCCGCC
CTGAAGCTGG CTGACCAGCT TGACCCTGCG CTGTGCCGGG TAAAGGTTGG CAAGGAGCTG
TTTACCAGCA GCGCTTCGGG CATTGTCGAA ACCCTGTGCG ACAAGGGCTT CGAAGTGTTC
CTCGACCTGA AGTTCCACGA CATCCCCAAC ACCACCGCCA TGGCGGTAAA GGCCGCCGCC
GAGATGGGTG TGTGGATGGT CAACGTGCAT TGCTCCGGTG GCCTGCGCAT GATGGCTGCC
TGCCGCGAAG AGCTGGCCAA GCGCAGCGGC CCGCAGCCGT TGCTGATTGG CGTGACCGTG
CTGACCAGCA TGGAACGCGA AGACCTGGCT GGCATTGGCC TGGACGTCGA CCCGCAGGAG
CAGGTGCTGC GCCTGGCGGC ACTGGCGCAA AAGGCCGGCA TGGACGGTTT GGTGTGCTCG
GCGCTTGAGG CCCCCGCGCT GAAGGCGGCG CACCCGTCGC TGCAACTGGT GACCCCGGGC
ATTCGCCCGG CGGGTAGCGC GCAGGATGAC CAGCGCCGTA TTCTCACTCC GCGCCAGGCA
CTGGATGCGG GTTCGGATTA CCTGGTGATC GGCCGGCCGA TCAGCCAGGC AGCCGACCCA
GCGCAAGCGC TGGCGGCGGT GGTGGCGGAG ATTCGTGGGT AA
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| Protein sequence | MSACQTPLIV ALDFPTREAA LKLADQLDPA LCRVKVGKEL FTSSASGIVE TLCDKGFEVF
LDLKFHDIPN TTAMAVKAAA EMGVWMVNVH CSGGLRMMAA CREELAKRSG PQPLLIGVTV
LTSMEREDLA GIGLDVDPQE QVLRLAALAQ KAGMDGLVCS ALEAPALKAA HPSLQLVTPG
IRPAGSAQDD QRRILTPRQA LDAGSDYLVI GRPISQAADP AQALAAVVAE IRG
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